Literature DB >> 15888672

Biological databases for plant research.

Seung Yon Rhee, Bill Crosby.   

Abstract

Mesh：

Year:  2005        PMID： 15888672      PMCID： PMC1104154          DOI： 10.1104/pp.104.900158

Source DB:  PubMed          Journal:  Plant Physiol        ISSN： 0032-0889            Impact factor:   8.340


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  10 in total

1.  Toward supportive data collection tools for plant metabolomics.

Authors:  Helen Jenkins; Helen Johnson; Baldeep Kular; Trevor Wang; Nigel Hardy
Journal:  Plant Physiol       Date:  2005-05       Impact factor: 8.340

2.  BioMOBY successfully integrates distributed heterogeneous bioinformatics Web Services. The PlaNet exemplar case.

Authors:  Mark Wilkinson; Heiko Schoof; Rebecca Ernst; Dirk Haase
Journal:  Plant Physiol       Date:  2005-05       Impact factor: 8.340

3.  Plant protein annotation in the UniProt Knowledgebase.

Authors:  Michel Schneider; Amos Bairoch; Cathy H Wu; Rolf Apweiler
Journal:  Plant Physiol       Date:  2005-05       Impact factor: 8.340

4.  The institute for genomic research Osa1 rice genome annotation database.

Authors:  Qiaoping Yuan; Shu Ouyang; Aihui Wang; Wei Zhu; Rama Maiti; Haining Lin; John Hamilton; Brian Haas; Razvan Sultana; Foo Cheung; Jennifer Wortman; C Robin Buell
Journal:  Plant Physiol       Date:  2005-05       Impact factor: 8.340

5.  MetaCyc and AraCyc. Metabolic pathway databases for plant research.

Authors:  Peifen Zhang; Hartmut Foerster; Christophe P Tissier; Lukas Mueller; Suzanne Paley; Peter D Karp; Seung Y Rhee
Journal:  Plant Physiol       Date:  2005-05       Impact factor: 8.340

6.  The maize genetics and genomics database. The community resource for access to diverse maize data.

Authors:  Carolyn J Lawrence; Trent E Seigfried; Volker Brendel
Journal:  Plant Physiol       Date:  2005-05       Impact factor: 8.340

7.  Databases and information integration for the Medicago truncatula genome and transcriptome.

Authors:  Steven B Cannon; John A Crow; Michael L Heuer; Xiaohong Wang; Ethalinda K S Cannon; Christopher Dwan; Anne-Francoise Lamblin; Jayprakash Vasdewani; Joann Mudge; Andrew Cook; John Gish; Foo Cheung; Steve Kenton; Timothy M Kunau; Douglas Brown; Gregory D May; Dongjin Kim; Douglas R Cook; Bruce A Roe; Chris D Town; Nevin D Young; Ernest F Retzel
Journal:  Plant Physiol       Date:  2005-05       Impact factor: 8.340

8.  Genome cluster database. A sequence family analysis platform for Arabidopsis and rice.

Authors:  Kevin Horan; Josh Lauricha; Julia Bailey-Serres; Natasha Raikhel; Thomas Girke
Journal:  Plant Physiol       Date:  2005-05       Impact factor: 8.340

9.  Potential of metabolomics as a functional genomics tool.

Authors:  Raoul J Bino; Robert D Hall; Oliver Fiehn; Joachim Kopka; Kazuki Saito; John Draper; Basil J Nikolau; Pedro Mendes; Ute Roessner-Tunali; Michael H Beale; Richard N Trethewey; B Markus Lange; Eve Syrkin Wurtele; Lloyd W Sumner
Journal:  Trends Plant Sci       Date:  2004-09       Impact factor: 18.313

10.  A proposed framework for the description of plant metabolomics experiments and their results.

Authors:  Helen Jenkins; Nigel Hardy; Manfred Beckmann; John Draper; Aileen R Smith; Janet Taylor; Oliver Fiehn; Royston Goodacre; Raoul J Bino; Robert Hall; Joachim Kopka; Geoffrey A Lane; B Markus Lange; Jang R Liu; Pedro Mendes; Basil J Nikolau; Stephen G Oliver; Norman W Paton; Sue Rhee; Ute Roessner-Tunali; Kazuki Saito; Jørn Smedsgaard; Lloyd W Sumner; Trevor Wang; Sean Walsh; Eve Syrkin Wurtele; Douglas B Kell
Journal:  Nat Biotechnol       Date:  2004-12       Impact factor: 54.908
  10 in total
  6 in total

1.  Web-based Arabidopsis functional and structural genomics resources.

Authors:  Yan Lu; Robert L Last
Journal:  Arabidopsis Book       Date:  2008-10-28

2.  Purdue ionomics information management system. An integrated functional genomics platform.

Authors:  Ivan Baxter; Mourad Ouzzani; Seza Orcun; Brad Kennedy; Shrinivas S Jandhyala; David E Salt
Journal:  Plant Physiol       Date:  2006-12-22       Impact factor: 8.340

3.  miSolRNA: A tomato micro RNA relational database.

Authors:  Ariel A Bazzini; Ramón Asís; Virginia González; Sebastián Bassi; Mariana Conte; Marcelo Soria; Alisdair R Fernie; Sebastián Asurmendi; Fernando Carrari
Journal:  BMC Plant Biol       Date:  2010-11-08       Impact factor: 4.215

4.  Regulatory link mapping between organisms.

Authors:  Rachita Sharma; Patricia A Evans; Virendrakumar C Bhavsar
Journal:  BMC Syst Biol       Date:  2011-05-04

5.  Information Management of Genome Enabled Data Streams for Pseudomonas syringae on the Pseudomonas-Plant Interaction (PPI) Website.

Authors:  Magdalen Lindeberg
Journal:  Genes (Basel)       Date:  2011-11-02       Impact factor: 4.096

6.  SolCyc: a database hub at the Sol Genomics Network (SGN) for the manual curation of metabolic networks in Solanum and Nicotiana specific databases.

Authors:  Hartmut Foerster; Aureliano Bombarely; James N D Battey; Nicolas Sierro; Nikolai V Ivanov; Lukas A Mueller
Journal:  Database (Oxford)       Date:  2018-01-01       Impact factor: 3.451
  6 in total

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