Literature DB >> 15884910

Deoxyribozyme-based ligase logic gates and their initial circuits.

Milan N Stojanovic1, Stanka Semova, Dmitry Kolpashchikov, Joanne Macdonald, Clint Morgan, Darko Stefanovic.   

Abstract

A complete set (YES, NOT, AND, and ANDNOT) of molecular scale logic gates based on ligase deoxyribozymes was constructed. The activity of these gates was visualized through the formation of cascades with downstream phosphodieseterase YES gates, which performed fluorogenic cleavage.

Mesh:

Substances:

Year:  2005        PMID: 15884910     DOI: 10.1021/ja043003a

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  21 in total

1.  Design of molecular logic devices based on a programmable DNA-regulated semisynthetic enzyme.

Authors:  Nathan C Gianneschi; M Reza Ghadiri
Journal:  Angew Chem Int Ed Engl       Date:  2007       Impact factor: 15.336

Review 2.  Functional nucleic acid sensors.

Authors:  Juewen Liu; Zehui Cao; Yi Lu
Journal:  Chem Rev       Date:  2009-05       Impact factor: 60.622

Review 3.  Biocomputers: from test tubes to live cells.

Authors:  Yaakov Benenson
Journal:  Mol Biosyst       Date:  2009-04-15

4.  Molecular computing by PNA:PNA duplex formation.

Authors:  Filbert Totsingan; Rosangela Marchelli; Roberto Corradini
Journal:  Artif DNA PNA XNA       Date:  2011-01

5.  Design of a biochemical circuit motif for learning linear functions.

Authors:  Matthew R Lakin; Amanda Minnich; Terran Lane; Darko Stefanovic
Journal:  J R Soc Interface       Date:  2014-12-06       Impact factor: 4.118

6.  Logic reversibility and thermodynamic irreversibility demonstrated by DNAzyme-based Toffoli and Fredkin logic gates.

Authors:  Ron Orbach; Françoise Remacle; R D Levine; Itamar Willner
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-12       Impact factor: 11.205

7.  Bridging the Two Worlds: A Universal Interface between Enzymatic and DNA Computing Systems.

Authors:  Shay Mailloux; Yulia V Gerasimova; Nataliia Guz; Dmitry M Kolpashchikov; Evgeny Katz
Journal:  Angew Chem Int Ed Engl       Date:  2015-04-09       Impact factor: 15.336

8.  DNA Computing Systems Activated by Electrochemically-triggered DNA Release from a Polymer-brush-modified Electrode Array.

Authors:  Maria Gamella; Andrey Zakharchenko; Nataliia Guz; Madeline Masi; Sergiy Minko; Dmitry M Kolpashchikov; Heiko Iken; Arshak Poghossian; Michael J Schöning; Evgeny Katz
Journal:  Electroanalysis       Date:  2016-08-05       Impact factor: 3.223

9.  Nucleic acid based logical systems.

Authors:  Da Han; Huaizhi Kang; Tao Zhang; Cuichen Wu; Cuisong Zhou; Mingxu You; Zhuo Chen; Xiaobing Zhang; Weihong Tan
Journal:  Chemistry       Date:  2014-04-01       Impact factor: 5.236

Review 10.  In vitro selection, characterization, and application of deoxyribozymes that cleave RNA.

Authors:  Scott K Silverman
Journal:  Nucleic Acids Res       Date:  2005-11-11       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.