Literature DB >> 15882148

Catalysis of potato epoxide hydrolase, StEH1.

Lisa T Elfström1, Mikael Widersten.   

Abstract

The kinetic mechanism of epoxide hydrolase (EC 3.3.2.3) from potato, StEH1 (Solanum tuberosum epoxide hydrolase 1), was studied by presteady-state and steady-state kinetics as well as by pH dependence of activity. The specific activities towards the different enantiomers of TSO (trans-stilbene oxide) as substrate were 43 and 3 micromol x min(-1) x mg(-1) with the R,R- or S,S-isomers respectively. The enzyme was, however, enantioselective in favour of the S,S enantiomer due to a lower K(m) value. The pH dependences of kcat with R,R or S,S-TSO were also distinct and supposedly reflecting the pH dependences of the individual kinetic rates during substrate conversion. The rate-limiting step for TSO and cis- and trans-epoxystearate was shown by rapid kinetic measurements to be the hydrolysis of the alkylenzyme intermediate. Functional characterization of point mutants verified residues Asp105, Tyr154, Tyr235 and His300 as crucial for catalytic activity. All mutants displayed drastically decreased enzymatic activities during steady state. Presteady-state measurements revealed the base-deficient H300N (His300-->Asn) mutant to possess greatly reduced efficiencies in catalysis of both chemical steps (alkylation and hydrolysis).

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Year:  2005        PMID: 15882148      PMCID: PMC1198943          DOI: 10.1042/BJ20050526

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  33 in total

1.  Mechanism of microsomal epoxide hydrolase. Semifunctional site-specific mutants affecting the alkylation half-reaction.

Authors:  L T Laughlin; H F Tzeng; S Lin; R N Armstrong
Journal:  Biochemistry       Date:  1998-03-03       Impact factor: 3.162

2.  Semifunctional site-specific mutants affecting the hydrolytic half-reaction of microsomal epoxide hydrolase.

Authors:  H F Tzeng; L T Laughlin; R N Armstrong
Journal:  Biochemistry       Date:  1998-03-03       Impact factor: 3.162

3.  Cloning and expression of soluble epoxide hydrolase from potato.

Authors:  A Stapleton; J K Beetham; F Pinot; J E Garbarino; D R Rockhold; M Friedman; B D Hammock; W R Belknap
Journal:  Plant J       Date:  1994-08       Impact factor: 6.417

4.  Occurrence of fatty acid epoxide hydrolases in soybean (Glycine max). Purification and characterization of the soluble form.

Authors:  E Blée; F Schuber
Journal:  Biochem J       Date:  1992-03-15       Impact factor: 3.857

5.  Primary structure and catalytic mechanism of the epoxide hydrolase from Agrobacterium radiobacter AD1.

Authors:  R Rink; M Fennema; M Smids; U Dehmel; D B Janssen
Journal:  J Biol Chem       Date:  1997-06-06       Impact factor: 5.157

6.  Regio- and enantioselectivity of soybean fatty acid epoxide hydrolase.

Authors:  E Blée; F Schuber
Journal:  J Biol Chem       Date:  1992-06-15       Impact factor: 5.157

7.  Mechanism of soluble epoxide hydrolase. Formation of an alpha-hydroxy ester-enzyme intermediate through Asp-333.

Authors:  B Borhan; A D Jones; F Pinot; D F Grant; M J Kurth; B D Hammock
Journal:  J Biol Chem       Date:  1995-11-10       Impact factor: 5.157

8.  Molecular and biochemical evidence for the involvement of the Asp-333-His-523 pair in the catalytic mechanism of soluble epoxide hydrolase.

Authors:  F Pinot; D F Grant; J K Beetham; A G Parker; B Borhan; S Landt; A D Jones; B D Hammock
Journal:  J Biol Chem       Date:  1995-04-07       Impact factor: 5.157

9.  Characterization of an Arabidopsis cDNA for a soluble epoxide hydrolase gene that is inducible by auxin and water stress.

Authors:  T Kiyosue; J K Beetham; F Pinot; B D Hammock; K Yamaguchi-Shinozaki; K Shinozaki
Journal:  Plant J       Date:  1994-08       Impact factor: 6.417

10.  Stereocontrolled hydrolysis of the linoleic acid monoepoxide regioisomers catalyzed by soybean epoxide hydrolase.

Authors:  E Blée; F Schuber
Journal:  Eur J Biochem       Date:  1995-05-15
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  15 in total

1.  X-ray structure of potato epoxide hydrolase sheds light on substrate specificity in plant enzymes.

Authors:  Sherry L Mowbray; Lisa T Elfström; Kerstin M Ahlgren; C Evalena Andersson; Mikael Widersten
Journal:  Protein Sci       Date:  2006-06-02       Impact factor: 6.725

2.  Removal of distal protein-water hydrogen bonds in a plant epoxide hydrolase increases catalytic turnover but decreases thermostability.

Authors:  Ann Thomaeus; Agata Naworyta; Sherry L Mowbray; Mikael Widersten
Journal:  Protein Sci       Date:  2008-05-30       Impact factor: 6.725

Review 3.  Cooperativity in monomeric enzymes with single ligand-binding sites.

Authors:  Carol M Porter; Brian G Miller
Journal:  Bioorg Chem       Date:  2011-11-17       Impact factor: 5.275

4.  Active-Site Flexibility and Substrate Specificity in a Bacterial Virulence Factor: Crystallographic Snapshots of an Epoxide Hydrolase.

Authors:  Kelli L Hvorecny; Christopher D Bahl; Seiya Kitamura; Kin Sing Stephen Lee; Bruce D Hammock; Christophe Morisseau; Dean R Madden
Journal:  Structure       Date:  2017-04-06       Impact factor: 5.006

5.  Determinants of reactivity and selectivity in soluble epoxide hydrolase from quantum mechanics/molecular mechanics modeling.

Authors:  Richard Lonsdale; Simon Hoyle; Daniel T Grey; Lars Ridder; Adrian J Mulholland
Journal:  Biochemistry       Date:  2012-02-10       Impact factor: 3.162

Review 6.  Computational tools for the evaluation of laboratory-engineered biocatalysts.

Authors:  Adrian Romero-Rivera; Marc Garcia-Borràs; Sílvia Osuna
Journal:  Chem Commun (Camb)       Date:  2016-12-22       Impact factor: 6.222

7.  Expanding the Catalytic Triad in Epoxide Hydrolases and Related Enzymes.

Authors:  Beat A Amrein; Paul Bauer; Fernanda Duarte; Åsa Janfalk Carlsson; Agata Naworyta; Sherry L Mowbray; Mikael Widersten; Shina C L Kamerlin
Journal:  ACS Catal       Date:  2015-08-17       Impact factor: 13.084

8.  Laboratory-Evolved Enzymes Provide Snapshots of the Development of Enantioconvergence in Enzyme-Catalyzed Epoxide Hydrolysis.

Authors:  Åsa Janfalk Carlsson; Paul Bauer; Doreen Dobritzsch; Mikael Nilsson; S C Lynn Kamerlin; Mikael Widersten
Journal:  Chembiochem       Date:  2016-08-02       Impact factor: 3.164

9.  Exploring the origins of selectivity in soluble epoxide hydrolase from Bacillus megaterium.

Authors:  Eila Serrano-Hervás; Marc Garcia-Borràs; Sílvia Osuna
Journal:  Org Biomol Chem       Date:  2017-10-25       Impact factor: 3.876

10.  Conformational diversity and enantioconvergence in potato epoxide hydrolase 1.

Authors:  P Bauer; Å Janfalk Carlsson; B A Amrein; D Dobritzsch; M Widersten; S C L Kamerlin
Journal:  Org Biomol Chem       Date:  2016-04-06       Impact factor: 3.876

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