Literature DB >> 15869382

Communication between noncontacting macromolecules.

Jens Völker1, Kenneth J Breslauer.   

Abstract

Molecular interactions are the language that molecules use to communicate recognition, binding, and regulation, events central to biological control mechanisms. Traditionally, such interactions involve direct, atom-to-atom, noncovalent contacts, or indirect contacts bridged by relatively fixed solvent molecules. Here we discuss a third class of molecular communication that, to date, has received less experimental attention, namely solvent-mediated communication between noncontacting macromolecules. This form of communication can be understood in terms of fundamental, well-established principles (coupled equilibria and linkage thermodynamics) that govern interactions between individual polymers and their solutions. In contrast to simple solutions used in laboratory studies, biological systems contain a multitude of nominally noninteracting biopolymers within the same solution environment. The exquisite control of biological function requires some form of communication between many of these solution components, even in the absence of direct and/or indirect contacts. Such communication must be considered when describing potential mechanisms of biological regulation.

Mesh:

Substances:

Year:  2005        PMID: 15869382     DOI: 10.1146/annurev.biophys.33.110502.133332

Source DB:  PubMed          Journal:  Annu Rev Biophys Biomol Struct        ISSN: 1056-8700


  9 in total

1.  The temperature dependence of salt-protein association is sequence specific.

Authors:  Liang Ma; Qiang Cui
Journal:  Biochemistry       Date:  2006-12-05       Impact factor: 3.162

2.  Genome size and metabolic intensity in tetrapods: a tale of two lines.

Authors:  Alexander E Vinogradov; Olga V Anatskaya
Journal:  Proc Biol Sci       Date:  2006-01-07       Impact factor: 5.349

Review 3.  Synthetic, Switchable Enzymes.

Authors:  Vic Norris; Sergey N Krylov; Pratul K Agarwal; Glenn J White
Journal:  J Mol Microbiol Biotechnol       Date:  2017-04-28

4.  A comparative kinetic and thermodynamic perspective of the σ-competition model in Escherichia coli.

Authors:  Abantika Ganguly; Dipankar Chatterji
Journal:  Biophys J       Date:  2012-09-19       Impact factor: 4.033

5.  Effects of temperature and salt concentration on the structural stability of human lymphotactin: insights from molecular simulations.

Authors:  Mark S Formaneck; Liang Ma; Qiang Cui
Journal:  J Am Chem Soc       Date:  2006-07-26       Impact factor: 15.419

6.  Preferential interactions between small solutes and the protein backbone: a computational analysis.

Authors:  Liang Ma; Laurel Pegram; M T Record; Qiang Cui
Journal:  Biochemistry       Date:  2010-03-09       Impact factor: 3.162

Review 7.  Protein Function Analysis through Machine Learning.

Authors:  Chris Avery; John Patterson; Tyler Grear; Theodore Frater; Donald J Jacobs
Journal:  Biomolecules       Date:  2022-09-06

Review 8.  Uracil-DNA glycosylase: Structural, thermodynamic and kinetic aspects of lesion search and recognition.

Authors:  Dmitry O Zharkov; Grigory V Mechetin; Georgy A Nevinsky
Journal:  Mutat Res       Date:  2009-11-10       Impact factor: 2.433

9.  Multivariate analysis and visualization of splicing correlations in single-gene transcriptomes.

Authors:  Mark C Emerick; Giovanni Parmigiani; William S Agnew
Journal:  BMC Bioinformatics       Date:  2007-01-18       Impact factor: 3.169

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.