Literature DB >> 15857781

Directed evolution of (betaalpha)(8)-barrel enzymes.

Birte Höcker1.   

Abstract

Natural molecular evolution supplies us with manifold examples of protein engineering. The imitation of these natural processes in the design of new enzymes has led to surprising and insightful results. Well-suited for design by evolutionary methods are enzymes with the common and versatile (betaalpha)(8)-barrel fold. Studies of enzyme stability, folding and design as well as the evolution of (betaalpha)(8)-barrel enzymes are discussed.

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Year:  2005        PMID: 15857781     DOI: 10.1016/j.bioeng.2004.09.005

Source DB:  PubMed          Journal:  Biomol Eng        ISSN: 1389-0344


  6 in total

1.  From amino acid to glucosinolate biosynthesis: protein sequence changes in the evolution of methylthioalkylmalate synthase in Arabidopsis.

Authors:  Jan-Willem de Kraker; Jonathan Gershenzon
Journal:  Plant Cell       Date:  2011-01-04       Impact factor: 11.277

Review 2.  Triosephosphate isomerase: a highly evolved biocatalyst.

Authors:  R K Wierenga; E G Kapetaniou; R Venkatesan
Journal:  Cell Mol Life Sci       Date:  2010-08-07       Impact factor: 9.261

3.  Similarity in Shape Dictates Signature Intrinsic Dynamics Despite No Functional Conservation in TIM Barrel Enzymes.

Authors:  Sandhya P Tiwari; Nathalie Reuter
Journal:  PLoS Comput Biol       Date:  2016-03-25       Impact factor: 4.475

4.  An allosteric pathway explains beneficial fitness in yeast for long-range mutations in an essential TIM barrel enzyme.

Authors:  Yvonne H Chan; Konstantin B Zeldovich; Charles R Matthews
Journal:  Protein Sci       Date:  2020-07-20       Impact factor: 6.725

Review 5.  Synthetic biology for the directed evolution of protein biocatalysts: navigating sequence space intelligently.

Authors:  Andrew Currin; Neil Swainston; Philip J Day; Douglas B Kell
Journal:  Chem Soc Rev       Date:  2015-03-07       Impact factor: 54.564

6.  De novo design of a four-fold symmetric TIM-barrel protein with atomic-level accuracy.

Authors:  Po-Ssu Huang; Kaspar Feldmeier; Fabio Parmeggiani; D Alejandro Fernandez Velasco; Birte Höcker; David Baker
Journal:  Nat Chem Biol       Date:  2015-11-23       Impact factor: 15.040

  6 in total

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