Literature DB >> 15846770

Automated quality assurance routines for fMRI data applied to a multicenter study.

Tony Stöcker1, Frank Schneider, Martina Klein, Ute Habel, Thilo Kellermann, Karl Zilles, N Jon Shah.   

Abstract

Standard procedures to achieve quality assessment (QA) of functional magnetic resonance imaging (fMRI) data are of great importance. A standardized and fully automated procedure for QA is presented that allows for classification of data quality and the detection of artifacts by inspecting temporal variations. The application of the procedure on phantom measurements was used to check scanner and stimulation hardware performance. In vivo imaging data were checked efficiently for artifacts within the standard fMRI post-processing procedure by realignment. Standardized and routinely carried out QA is essential for extensive data amounts as collected in fMRI, especially in multicenter studies. Furthermore, for the comparison of two different groups, it is important to ensure that data quality is approximately equal to avoid possible misinterpretations. This is shown by example, and criteria to quantify differences of data quality between two groups are defined.

Mesh:

Year:  2005        PMID: 15846770      PMCID: PMC6871722          DOI: 10.1002/hbm.20096

Source DB:  PubMed          Journal:  Hum Brain Mapp        ISSN: 1065-9471            Impact factor:   5.038


  15 in total

1.  Quality control for functional magnetic resonance imaging using automated data analysis and Shewhart charting.

Authors:  A Simmons; E Moore; S C Williams
Journal:  Magn Reson Med       Date:  1999-06       Impact factor: 4.668

2.  Variability in fMRI: an examination of intersession differences.

Authors:  D J McGonigle; A M Howseman; B S Athwal; K J Friston; R S Frackowiak; A P Holmes
Journal:  Neuroimage       Date:  2000-06       Impact factor: 6.556

3.  Automatic quality assessment protocol for MRI equipment.

Authors:  P Bourel; D Gibon; E Coste; V Daanen; J Rousseau
Journal:  Med Phys       Date:  1999-12       Impact factor: 4.071

4.  IMPACT: image-based physiological artifacts estimation and correction technique for functional MRI.

Authors:  K H Chuang; J H Chen
Journal:  Magn Reson Med       Date:  2001-08       Impact factor: 4.668

5.  Image analysis methods for assessing levels of image plane nonuniformity and stochastic noise in a magnetic resonance image of a homogeneous phantom.

Authors:  P Magnusson; L E Olsson
Journal:  Med Phys       Date:  2000-08       Impact factor: 4.071

6.  Test-retest reliability estimation of functional MRI data.

Authors:  Ranjan Maitra; Steven R Roys; Rao P Gullapalli
Journal:  Magn Reson Med       Date:  2002-07       Impact factor: 4.668

7.  Monitoring eye movements during fMRI tasks with echo planar images.

Authors:  Jason R Tregellas; Jody L Tanabe; David E Miller; Robert Freedman
Journal:  Hum Brain Mapp       Date:  2002-12       Impact factor: 5.038

8.  Assessment of reliability in functional imaging studies.

Authors:  Karsten Specht; Klaus Willmes; N Jon Shah; Lutz Jäncke
Journal:  J Magn Reson Imaging       Date:  2003-04       Impact factor: 4.813

9.  Estimation of the noise in magnitude MR images.

Authors:  J Sijbers; A J den Dekker; J Van Audekerke; M Verhoye; D Van Dyck
Journal:  Magn Reson Imaging       Date:  1998       Impact factor: 2.546

10.  Optimization of experimental design in fMRI: a general framework using a genetic algorithm.

Authors:  Tor D Wager; Thomas E Nichols
Journal:  Neuroimage       Date:  2003-02       Impact factor: 6.556

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  32 in total

Review 1.  Function biomedical informatics research network recommendations for prospective multicenter functional MRI studies.

Authors:  Gary H Glover; Bryon A Mueller; Jessica A Turner; Theo G M van Erp; Thomas T Liu; Douglas N Greve; James T Voyvodic; Jerod Rasmussen; Gregory G Brown; David B Keator; Vince D Calhoun; Hyo Jong Lee; Judith M Ford; Daniel H Mathalon; Michele Diaz; Daniel S O'Leary; Syam Gadde; Adrian Preda; Kelvin O Lim; Cynthia G Wible; Hal S Stern; Aysenil Belger; Gregory McCarthy; Burak Ozyurt; Steven G Potkin
Journal:  J Magn Reson Imaging       Date:  2012-02-07       Impact factor: 4.813

2.  Neuregulin 1 ICE-single nucleotide polymorphism in first episode schizophrenia correlates with cerebral activation in fronto-temporal areas.

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Journal:  Eur Arch Psychiatry Clin Neurosci       Date:  2008-09-19       Impact factor: 5.270

3.  Magnetic resonance perfusion imaging of resting-state cerebral blood flow in preclinical Huntington's disease.

Authors:  Robert C Wolf; Georg Grön; Fabio Sambataro; Nenad Vasic; Nadine D Wolf; Philipp A Thomann; Carsten Saft; G Bernhard Landwehrmeyer; Michael Orth
Journal:  J Cereb Blood Flow Metab       Date:  2011-05-11       Impact factor: 6.200

4.  Staying responsive to the world: modality-specific and -nonspecific contributions to speeded auditory, tactile, and visual stimulus detection.

Authors:  Robert Langner; Thilo Kellermann; Simon B Eickhoff; Frank Boers; Anjan Chatterjee; Klaus Willmes; Walter Sturm
Journal:  Hum Brain Mapp       Date:  2011-03-24       Impact factor: 5.038

5.  Overnight deprivation from smoking disrupts amygdala responses to fear.

Authors:  Oezguer A Onur; Alexandra Patin; Yoan Mihov; Boris Buecher; Birgit Stoffel-Wagner; Thomas E Schlaepfer; Henrik Walter; Wolfgang Maier; René Hurlemann
Journal:  Hum Brain Mapp       Date:  2011-05-26       Impact factor: 5.038

6.  Data quality in fMRI and simultaneous EEG-fMRI.

Authors:  Toni Ihalainen; Linda Kuusela; Sampsa Turunen; Sami Heikkinen; Sauli Savolainen; Outi Sipilä
Journal:  MAGMA       Date:  2014-04-26       Impact factor: 2.310

7.  Automating PACS Quality Control with the Vanderbilt Image Processing Enterprise Resource.

Authors:  Michael L Esparza; E Brian Welch; Bennett A Landman
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2012-02-12

Review 8.  Standardization of Small Animal Imaging-Current Status and Future Prospects.

Authors:  Julia G Mannheim; Firat Kara; Janine Doorduin; Kerstin Fuchs; Gerald Reischl; Sayuan Liang; Marleen Verhoye; Felix Gremse; Laura Mezzanotte; Marc C Huisman
Journal:  Mol Imaging Biol       Date:  2018-10       Impact factor: 3.488

Review 9.  Current trends and challenges in MRI acquisitions to investigate brain function.

Authors:  Bradley P Sutton; Cheng Ouyang; Dimitrios C Karampinos; Gregory A Miller
Journal:  Int J Psychophysiol       Date:  2009-02-21       Impact factor: 2.997

10.  Investigation and validation of intersite fMRI studies using the same imaging hardware.

Authors:  Bradley P Sutton; Joshua Goh; Andrew Hebrank; Robert C Welsh; Michael W L Chee; Denise C Park
Journal:  J Magn Reson Imaging       Date:  2008-07       Impact factor: 4.813

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