Literature DB >> 15831588

Semipermeable lipid bilayers exhibit diastereoselectivity favoring ribose.

M G Sacerdote1, J W Szostak.   

Abstract

Nutrient uptake by a primitive cell would have been limited by the permeability characteristics of its membrane. We measured the permeabilities of model protocellular membranes to water, five of the six pentoses, and selected aldohexoses, ketohexoses, and three to six carbon alditols by following volume changes of vesicles after the addition of solute to the external medium. Solute hydrophobicities correlated poorly with permeability coefficients within one structural class of compounds. The permeability coefficients of diastereomeric sugars differed by as much as a factor of 10, with ribose being the most permeable aldopentose. Flexible alditols and sugars, sugars biased toward or restricted to furanose forms, and sugars having anomers with hydrophobic faces permeated more quickly than compounds lacking these features. Among the aldopentoses, only ribose possesses all of these properties. Ribose permeated both fatty acid and phospholipid membranes more rapidly than the other aldopentoses or hexoses. The enhanced permeability conferred by the unique conformational preferences of ribose would have allowed faster assimilation of ribose by primitive cells as they passively absorbed materials from the environment. The kinetic advantage of ribose over the other aldopentoses in crossing membranes may therefore have been one factor that facilitated the emergence of the RNA world.

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Year:  2005        PMID: 15831588      PMCID: PMC556129          DOI: 10.1073/pnas.0408440102

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  22 in total

1.  Borate minerals stabilize ribose.

Authors:  A Ricardo; M A Carrigan; A N Olcott; S A Benner
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2.  Membrane growth can generate a transmembrane pH gradient in fatty acid vesicles.

Authors:  Irene A Chen; Jack W Szostak
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-17       Impact factor: 11.205

3.  Selective derivatization and sequestration of ribose from a prebiotic mix.

Authors:  Greg Springsteen; Gerald F Joyce
Journal:  J Am Chem Soc       Date:  2004-08-11       Impact factor: 15.419

4.  Preparation of vesicles from nonphospholipid amphiphiles.

Authors:  Pierre-Alain Monnard; David W Deamer
Journal:  Methods Enzymol       Date:  2003       Impact factor: 1.600

5.  Chemical etiology of nucleic acid structure: comparing pentopyranosyl-(2'-->4') oligonucleotides with RNA.

Authors:  M Beier; F Reck; T Wagner; R Krishnamurthy; A Eschenmoser
Journal:  Science       Date:  1999-01-29       Impact factor: 47.728

6.  Permeability of the bovine red cell to glycerol in hyperosmotic solutions at various temperatures.

Authors:  P Mazur; S P Leibo; R H Miller
Journal:  J Membr Biol       Date:  1974       Impact factor: 1.843

7.  Ufasomes are stable particles surrounded by unsaturated fatty acid membranes.

Authors:  J M Gebicki; M Hicks
Journal:  Nature       Date:  1973-05-25       Impact factor: 49.962

8.  Studies in prebiotic synthesis. V. Synthesis and photoanomerization of pyrimidine nucleosides.

Authors:  R A Sanchez; L E Orgel
Journal:  J Mol Biol       Date:  1970-02-14       Impact factor: 5.469

9.  Molecular recognition of carbohydrates by a resorcinarene. Selective transport of alditols through a supported liquid membrane.

Authors:  N Tbeur; T Rhlalou; M Hlaïbi; D Langevin; M Métayer; J F Verchère
Journal:  Carbohydr Res       Date:  2000-11-03       Impact factor: 2.104

10.  Preparation and properties of vesicles enclosed by fatty acid membranes.

Authors:  J M Gebicki; M Hicks
Journal:  Chem Phys Lipids       Date:  1976-03       Impact factor: 3.329

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  43 in total

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5.  Sugar synthesis in a protocellular model leads to a cell signalling response in bacteria.

Authors:  Paul M Gardner; Klaus Winzer; Benjamin G Davis
Journal:  Nat Chem       Date:  2009-07-24       Impact factor: 24.427

6.  Towards co-evolution of membrane proteins and metabolism.

Authors:  Michael A Wilson; Chenyu Wei; Andrew Pohorille
Journal:  Orig Life Evol Biosph       Date:  2015-01-23       Impact factor: 1.950

Review 7.  Beyond DNA and RNA: The Expanding Toolbox of Synthetic Genetics.

Authors:  Alexander I Taylor; Gillian Houlihan; Philipp Holliger
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-06-03       Impact factor: 10.005

Review 8.  Membranes and the Origin of Life: A Century of Conjecture.

Authors:  David Deamer
Journal:  J Mol Evol       Date:  2016-12-02       Impact factor: 2.395

Review 9.  Membrane transport in primitive cells.

Authors:  Sheref S Mansy
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-04-21       Impact factor: 10.005

10.  Multilevel selection in models of prebiotic evolution II: a direct comparison of compartmentalization and spatial self-organization.

Authors:  Nobuto Takeuchi; Paulien Hogeweg
Journal:  PLoS Comput Biol       Date:  2009-10-16       Impact factor: 4.475

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