Literature DB >> 15828060

Possible steps to the emergence of life: the [GADV]-protein world hypothesis.

Kenji Ikehara1.   

Abstract

Based on the fact that RNA has not only a genetic function but also a catalytic function, the RNA world theory on the origin of life was first proposed about 20 years ago. The theory assumes that RNA was amplified by self-replication to increase RNA diversity on the primitive earth. Since then, the theory has been widely accepted as the most likely explanation for the emergence of life. In contrast, we reached another hypothesis, the [GADV]-protein world hypothesis, which is based on pseudo-replication of [GADV]-proteins. We reached this hypothesis during studies on the origins of genes and the genetic code, where [G], [A], [D], and [V] refer to Gly, Ala, Asp, and Val, respectively. In this review, possible steps to the emergence of life are discussed from the standpoint of the [GADV]-protein world hypothesis, comparing it in parallel with the RNA world theory. It is also shown that [GADV]-peptides, which were produced by repeated dry-heating cycles and by solid phase peptide synthesis, have catalytic activities, hydrolyzing peptide bonds in a natural protein, bovine serum albumin. These experimental results support the [GADV]-protein world hypothesis for the origin of life.

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Year:  2005        PMID: 15828060     DOI: 10.1002/tcr.20037

Source DB:  PubMed          Journal:  Chem Rec        ISSN: 1528-0691            Impact factor:   6.771


  24 in total

1.  One-step formation of oligopeptide-like molecules from Glu and Asp in hydrothermal environments.

Authors:  Kunio Kawamura; Masanori Shimahashi
Journal:  Naturwissenschaften       Date:  2008-02-06

2.  Self-propagating beta-sheet polypeptide structures as prebiotic informational molecular entities: the amyloid world.

Authors:  C P J Maury
Journal:  Orig Life Evol Biosph       Date:  2009-03-20       Impact factor: 1.950

3.  Protein ordered sequences are formed by random joining of amino acids in protein 0(th)-order structure, followed by evolutionary process.

Authors:  Kenji Ikehara
Journal:  Orig Life Evol Biosph       Date:  2015-01-14       Impact factor: 1.950

4.  A new start from ground zero?

Authors:  Pier Luigi Luisi
Journal:  Orig Life Evol Biosph       Date:  2015-01-25       Impact factor: 1.950

5.  Predicting three-dimensional conformations of peptides constructed of only glycine, alanine, aspartic acid, and valine.

Authors:  Akifumi Oda; Shuichi Fukuyoshi
Journal:  Orig Life Evol Biosph       Date:  2015-03-21       Impact factor: 1.950

6.  Abiotic formation of valine peptides under conditions of high temperature and high pressure.

Authors:  Yoshihiro Furukawa; Tsubasa Otake; Takato Ishiguro; Hiromoto Nakazawa; Takeshi Kakegawa
Journal:  Orig Life Evol Biosph       Date:  2012-08-23       Impact factor: 1.950

7.  The Origin of tRNA Deduced from Pseudomonas aeruginosa 5' Anticodon-Stem Sequence : Anticodon-stem loop hypothesis.

Authors:  Kenji Ikehara
Journal:  Orig Life Evol Biosph       Date:  2019-05-10       Impact factor: 1.950

Review 8.  Mechanisms of protein evolution.

Authors:  Vijay Jayaraman; Saacnicteh Toledo-Patiño; Lianet Noda-García; Paola Laurino
Journal:  Protein Sci       Date:  2022-07       Impact factor: 6.993

9.  Concentration of specific amino acids at the catalytic/active centers of highly-conserved "housekeeping" enzymes of central metabolism in archaea, bacteria and Eukaryota: is there a widely conserved chemical signal of prebiotic assembly?

Authors:  J Dennis Pollack; Xueliang Pan; Dennis K Pearl
Journal:  Orig Life Evol Biosph       Date:  2010-01-13       Impact factor: 1.950

10.  The Ancient Operational Code is Embedded in the Amino Acid Substitution Matrix and aaRS Phylogenies.

Authors:  Julia A Shore; Barbara R Holland; Jeremy G Sumner; Kay Nieselt; Peter R Wills
Journal:  J Mol Evol       Date:  2019-11-28       Impact factor: 2.395

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