Literature DB >> 15823416

The origin of the genetic code: theories and their relationships, a review.

Massimo Di Giulio1.   

Abstract

A review of the main theories proposed to explain the origin of the genetic code is presented. I analyze arguments and data in favour of different theories proposed to explain the origin of the organization of the genetic code. It is possible to suggest a mechanism that makes compatible the different theories of the origin of the code, even if these are based on a historical or physicochemical determinism and thus appear incompatible by definition. Finally, I discuss the question of why a given number of synonymous codons was attributed to the amino acids in the genetic code.

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Year:  2004        PMID: 15823416     DOI: 10.1016/j.biosystems.2004.11.005

Source DB:  PubMed          Journal:  Biosystems        ISSN: 0303-2647            Impact factor:   1.973


  39 in total

1.  Hypothesis: emergence of translation as a result of RNA helicase evolution.

Authors:  Nikolay Zenkin
Journal:  J Mol Evol       Date:  2012-04-28       Impact factor: 2.395

2.  Metabolic basis for the self-referential genetic code.

Authors:  Romeu Cardoso Guimarães
Journal:  Orig Life Evol Biosph       Date:  2010-11-06       Impact factor: 1.950

3.  An asymmetric underlying rule in the assignment of codons: possible clue to a quick early evolution of the genetic code via successive binary choices.

Authors:  Marc Delarue
Journal:  RNA       Date:  2006-12-12       Impact factor: 4.942

4.  The genetic code is nearly optimal for allowing additional information within protein-coding sequences.

Authors:  Shalev Itzkovitz; Uri Alon
Journal:  Genome Res       Date:  2007-02-09       Impact factor: 9.043

5.  Amino acid exchangeability and the adaptive code hypothesis.

Authors:  Arlin Stoltzfus; Lev Y Yampolsky
Journal:  J Mol Evol       Date:  2007-09-26       Impact factor: 2.395

6.  The origin of modern terrestrial life.

Authors:  Patrick Forterre; Simonetta Gribaldo
Journal:  HFSP J       Date:  2007-07-25

7.  A self-referential model for the formation of the genetic code.

Authors:  Romeu Cardoso Guimarães; Carlos Henrique Costa Moreira; Sávio Torres de Farias
Journal:  Theory Biosci       Date:  2008-05-21       Impact factor: 1.919

Review 8.  Optimization models and the structure of the genetic code.

Authors:  J L Jestin; A Kempf
Journal:  J Mol Evol       Date:  2009-10-20       Impact factor: 2.395

9.  A model-independent approach to infer hierarchical codon substitution dynamics.

Authors:  Olof Görnerup; Martin Nilsson Jacobi
Journal:  BMC Bioinformatics       Date:  2010-04-23       Impact factor: 3.169

10.  Exceptional error minimization in putative primordial genetic codes.

Authors:  Artem S Novozhilov; Eugene V Koonin
Journal:  Biol Direct       Date:  2009-11-19       Impact factor: 4.540

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