Literature DB >> 15810435

Transaldolase of Methanocaldococcus jannaschii.

Tim Soderberg1, Robert C Alver.   

Abstract

The Methanocaldococcus jannaschii genome contains putative genes for all four nonoxidative pentose phosphate pathway enzymes. Open reading frame (ORF) MJ0960 is a member of the mipB/talC family of 'transaldolase-like' genes, so named because of their similarity to the well-characterized transaldolase B gene family. However, recently, it has been reported that both the mipB and the talC genes from Escherichia coli encode novel enzymes with fructose-6-phosphate aldolase activity, not transaldolase activity (Schürmann and Sprenger 2001). The same study reports that other members of the mipB/talC family appear to encode transaldolases. To confirm the function of MJ0960 and to clarify the presence of a nonoxidative pentose phosphate pathway in M. jannaschii, we have cloned ORF MJ0960 from M. jannaschii genomic DNA and purified the recombinant protein. MJ0960 encodes a transaldolase and displays no fructose-6-phosphate aldolase activity. It etained full activity for 4 h at 80 degrees C, and for 3 weeks at 25 degrees C. Methanocaldococcus jannaschii transaldolase has a maximal velocity (Vmax) of 1.0 +/- 0.2 micromol min(-1) mg(-1) at 25 degrees C, whereas Vmax = 12.0 +/- 0.5 micromol min(-1) mg(-1) at 50 degrees C. Apparent Michaelis constants at 50 degrees C were Km = 0.65 +/- 0.09 mM for fructose-6-phosphate and Km = 27.8 +/- 4.3 microM for erythrose-4-phosphate. When ribose-5-phosphate replaced erythrose-4-phosphate as an aldose acceptor, Vmax decreased twofold, whereas the Km was 150-fold higher. The molecular mass of the active enzyme is 271 +/- 27 kDa as estimated by gel filtration, whereas the predicted monomer size is 23.96 kDa, suggesting that the native form of the protein is probably a decamer. A readily available source of thermophilic pentose phosphate pathway enzymes including transaldolase may have direct application in enzymatic biohydrogen production.

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Year:  2004        PMID: 15810435      PMCID: PMC2685571          DOI: 10.1155/2004/608428

Source DB:  PubMed          Journal:  Archaea            Impact factor:   3.273


  20 in total

1.  Fructose-6-phosphate aldolase is a novel class I aldolase from Escherichia coli and is related to a novel group of bacterial transaldolases.

Authors:  M Schurmann; G A Sprenger
Journal:  J Biol Chem       Date:  2000-12-18       Impact factor: 5.157

2.  Enzymatic production of biohydrogen.

Authors:  J Woodward; M Orr; K Cordray; E Greenbaum
Journal:  Nature       Date:  2000-06-29       Impact factor: 49.962

Review 3.  Microbial genomes and "missing" enzymes: redefining biochemical pathways.

Authors:  S J Cordwell
Journal:  Arch Microbiol       Date:  1999-11       Impact factor: 2.552

Review 4.  Developments in industrially important thermostable enzymes: a review.

Authors:  G D Haki; S K Rakshit
Journal:  Bioresour Technol       Date:  2003-08       Impact factor: 9.642

5.  A hyperthermostable D-ribose-5-phosphate isomerase from Pyrococcus horikoshii characterization and three-dimensional structure.

Authors:  Kazuhiko Ishikawa; Ikuo Matsui; Francoise Payan; Christian Cambillau; Hiroyasu Ishida; Yutaka Kawarabayasi; Hisasi Kikuchi; Alain Roussel
Journal:  Structure       Date:  2002-06       Impact factor: 5.006

6.  Crystal structure of decameric fructose-6-phosphate aldolase from Escherichia coli reveals inter-subunit helix swapping as a structural basis for assembly differences in the transaldolase family.

Authors:  Stina Thorell; Melanie Schürmann; Georg A Sprenger; Gunter Schneider
Journal:  J Mol Biol       Date:  2002-05-24       Impact factor: 5.469

7.  Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase.

Authors:  R K Saiki; D H Gelfand; S Stoffel; S J Scharf; R Higuchi; G T Horn; K B Mullis; H A Erlich
Journal:  Science       Date:  1988-01-29       Impact factor: 47.728

8.  Identification of catalytically important residues in the active site of Escherichia coli transaldolase.

Authors:  U Schörken; S Thorell; M Schürmann; J Jia; G A Sprenger; G Schneider
Journal:  Eur J Biochem       Date:  2001-04

9.  The three-dimensional structure of human transaldolase.

Authors:  S Thorell; P Gergely; K Banki; A Perl; G Schneider
Journal:  FEBS Lett       Date:  2000-06-23       Impact factor: 4.124

10.  Pathway of glycogen metabolism in Methanococcus maripaludis.

Authors:  J P Yu; J Ladapo; W B Whitman
Journal:  J Bacteriol       Date:  1994-01       Impact factor: 3.490

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2.  Form III RubisCO-mediated transaldolase variant of the Calvin cycle in a chemolithoautotrophic bacterium.

Authors:  Evgenii N Frolov; Ilya V Kublanov; Stepan V Toshchakov; Evgenii A Lunev; Nikolay V Pimenov; Elizaveta A Bonch-Osmolovskaya; Alexander V Lebedinsky; Nikolay A Chernyh
Journal:  Proc Natl Acad Sci U S A       Date:  2019-08-26       Impact factor: 11.205

3.  The characterization of transaldolase gene tal from Pichia stipitis and its heterologous expression in Fusarium oxysporum.

Authors:  Jin-xia Fan; Qian Yang; Zhi-hua Liu; Xiao-mei Huang; Jin-zhu Song; Zhong-xiang Chen; Yan Sun; Qing Liang; Shuang Wang
Journal:  Mol Biol Rep       Date:  2010-09-16       Impact factor: 2.316

4.  Biosynthesis of ribose-5-phosphate and erythrose-4-phosphate in archaea: a phylogenetic analysis of archaeal genomes.

Authors:  Tim Soderberg
Journal:  Archaea       Date:  2005-05       Impact factor: 3.273

5.  Ribose-5-phosphate biosynthesis in Methanocaldococcus jannaschii occurs in the absence of a pentose-phosphate pathway.

Authors:  Laura L Grochowski; Huimin Xu; Robert H White
Journal:  J Bacteriol       Date:  2005-11       Impact factor: 3.490

6.  Subcellular distribution of central carbohydrate metabolism pathways in the red alga Cyanidioschyzon merolae.

Authors:  Takashi Moriyama; Kenta Sakurai; Kohsuke Sekine; Naoki Sato
Journal:  Planta       Date:  2014-07-10       Impact factor: 4.116

7.  Genomic Comparison of Two Family-Level Groups of the Uncultivated NAG1 Archaeal Lineage from Chemically and Geographically Disparate Hot Springs.

Authors:  Eric D Becraft; Jeremy A Dodsworth; Senthil K Murugapiran; Scott C Thomas; J Ingemar Ohlsson; Ramunas Stepanauskas; Brian P Hedlund; Wesley D Swingley
Journal:  Front Microbiol       Date:  2017-10-31       Impact factor: 5.640

8.  Transaldolase in Bacillus methanolicus: biochemical characterization and biological role in ribulose monophosphate cycle.

Authors:  Johannes Pfeifenschneider; Benno Markert; Jessica Stolzenberger; Trygve Brautaset; Volker F Wendisch
Journal:  BMC Microbiol       Date:  2020-03-24       Impact factor: 3.605

  8 in total

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