Literature DB >> 15808981

Removing the effects of task-related motion using independent-component analysis.

Takanori Kochiyama1, Tomoyo Morita, Tomohisa Okada, Yoshiharu Yonekura, Michikazu Matsumura, Norihiro Sadato.   

Abstract

Task-related motion is a major source of noise in functional magnetic-resonance imaging (fMRI) time series. The motion effect usually persists even after perfect spatial realignment is achieved. Here, we propose a new method to remove a certain type of task-related motion effect that persists after realignment. The procedure consists of the following: the decomposition of the realigned time-series data into spatially-independent components using independent-component analysis (ICA); the automatic classification and rejection of the ICs of the task-related residual motion effects; and finally, a reconstruction without them. To classify the ICs, we utilized the associated task-related changes in signal intensity and variance. The effectiveness of the method was verified using an fMRI experiment that explicitly included head motion as a main effect. The results indicate that our ICA-based method removed the task-related motion effects more effectively than the conventional voxel-wise regression-based method.

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Year:  2005        PMID: 15808981     DOI: 10.1016/j.neuroimage.2004.12.027

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  30 in total

1.  Automatic independent component labeling for artifact removal in fMRI.

Authors:  Jussi Tohka; Karin Foerde; Adam R Aron; Sabrina M Tom; Arthur W Toga; Russell A Poldrack
Journal:  Neuroimage       Date:  2007-10-25       Impact factor: 6.556

2.  A comparison of denoising pipelines in high temporal resolution task-based functional magnetic resonance imaging data.

Authors:  Andrew R Mayer; Josef M Ling; Andrew B Dodd; Nicholas A Shaff; Christopher J Wertz; Faith M Hanlon
Journal:  Hum Brain Mapp       Date:  2019-05-22       Impact factor: 5.038

3.  Visual inspection of independent components: defining a procedure for artifact removal from fMRI data.

Authors:  Robert E Kelly; George S Alexopoulos; Zhishun Wang; Faith M Gunning; Christopher F Murphy; Sarah Shizuko Morimoto; Dora Kanellopoulos; Zhiru Jia; Kelvin O Lim; Matthew J Hoptman
Journal:  J Neurosci Methods       Date:  2010-04-08       Impact factor: 2.390

4.  Neural changes after phonological treatment for anomia: An fMRI study.

Authors:  Elizabeth Rochon; Carol Leonard; Hana Burianova; Laura Laird; Peter Soros; Simon Graham; Cheryl Grady
Journal:  Brain Lang       Date:  2010-06-14       Impact factor: 2.381

Review 5.  Motion artifact in studies of functional connectivity: Characteristics and mitigation strategies.

Authors:  Theodore D Satterthwaite; Rastko Ciric; David R Roalf; Christos Davatzikos; Danielle S Bassett; Daniel H Wolf
Journal:  Hum Brain Mapp       Date:  2017-11-01       Impact factor: 5.038

6.  Impact of in-scanner head motion on multiple measures of functional connectivity: relevance for studies of neurodevelopment in youth.

Authors:  Theodore D Satterthwaite; Daniel H Wolf; James Loughead; Kosha Ruparel; Mark A Elliott; Hakon Hakonarson; Ruben C Gur; Raquel E Gur
Journal:  Neuroimage       Date:  2012-01-02       Impact factor: 6.556

7.  Cross-hemispheric functional connectivity in the human fetal brain.

Authors:  Moriah E Thomason; Maya T Dassanayake; Stephen Shen; Yashwanth Katkuri; Mitchell Alexis; Amy L Anderson; Lami Yeo; Swati Mody; Edgar Hernandez-Andrade; Sonia S Hassan; Colin Studholme; Jeong-Won Jeong; Roberto Romero
Journal:  Sci Transl Med       Date:  2013-02-20       Impact factor: 17.956

8.  Evaluation of preprocessing steps to compensate for magnetic field distortions due to body movements in BOLD fMRI.

Authors:  Robert L Barry; Joy M Williams; L Martyn Klassen; Jason P Gallivan; Jody C Culham; Ravi S Menon
Journal:  Magn Reson Imaging       Date:  2009-08-19       Impact factor: 2.546

9.  Regression Models for Identifying Noise Sources in Magnetic Resonance Images.

Authors:  Hongtu Zhu; Yimei Li; Joseph G Ibrahim; Xiaoyan Shi; Hongyu An; Yashen Chen; Wei Gao; Weili Lin; Daniel B Rowe; Bradley S Peterson
Journal:  J Am Stat Assoc       Date:  2009-06-01       Impact factor: 5.033

Review 10.  Methods for cleaning the BOLD fMRI signal.

Authors:  César Caballero-Gaudes; Richard C Reynolds
Journal:  Neuroimage       Date:  2016-12-09       Impact factor: 6.556

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