Literature DB >> 1579459

Oligonucleotide hybridizations on glass supports: a novel linker for oligonucleotide synthesis and hybridization properties of oligonucleotides synthesised in situ.

U Maskos1, E M Southern.   

Abstract

A novel linker for the synthesis of oligonucleotides on a glass support is described. Oligonucleotides synthesised on the support remain tethered to the support after ammonia treatment and are shown to take part in sequence specific hybridisation reactions. These hybridizations were carried out with oligonucleotides synthesised on 'ballotini' solid sphere glass beads and microscope slides. The linker has a hexaethylene glycol spacer, bound to the glass via a glycidoxypropyl silane, terminating in a primary hydroxyl group that serves as starting point for automated or manual oligonucleotide synthesis.

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Year:  1992        PMID: 1579459      PMCID: PMC312256          DOI: 10.1093/nar/20.7.1679

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  14 in total

1.  A versatile solid support system for oligodeoxynucleotide probe-based hybridization assays.

Authors:  J Van Ness; S Kalbfleisch; C R Petrie; M W Reed; J C Tabone; N M Vermeulen
Journal:  Nucleic Acids Res       Date:  1991-06-25       Impact factor: 16.971

2.  Autoradiography using storage phosphor technology.

Authors:  R F Johnston; S C Pickett; D L Barker
Journal:  Electrophoresis       Date:  1990-05       Impact factor: 3.535

3.  Reversible and specific interaction of dehydrogenases with a coenzyme-coated surface continuously monitored with a reflectometer.

Authors:  C F Mandenius; K Mosbach; S Welin; I Lundström
Journal:  Anal Biochem       Date:  1986-09       Impact factor: 3.365

Review 4.  Analytical strategies for the use of DNA probes.

Authors:  J A Matthews; L J Kricka
Journal:  Anal Biochem       Date:  1988-02-15       Impact factor: 3.365

5.  Base-base mismatches. Thermodynamics of double helix formation for dCA3XA3G + dCT3YT3G (X, Y = A,C,G,T).

Authors:  F Aboul-ela; D Koh; I Tinoco; F H Martin
Journal:  Nucleic Acids Res       Date:  1985-07-11       Impact factor: 16.971

6.  A method for DNA sequencing by hybridization with oligonucleotide matrix.

Authors:  K R Khrapko; A A Khorlin; I B Ivanov; G M Yershov; S K Vasilenko; V L Florentiev; A D Mirzabekov
Journal:  DNA Seq       Date:  1991

7.  Single-base mutational analysis of cancer and genetic diseases using membrane bound modified oligonucleotides.

Authors:  Y Zhang; M Y Coyne; S G Will; C H Levenson; E S Kawasaki
Journal:  Nucleic Acids Res       Date:  1991-07-25       Impact factor: 16.971

8.  Genetic analysis of amplified DNA with immobilized sequence-specific oligonucleotide probes.

Authors:  R K Saiki; P S Walsh; C H Levenson; H A Erlich
Journal:  Proc Natl Acad Sci U S A       Date:  1989-08       Impact factor: 11.205

9.  Hybridization properties of immobilized nucleic acids.

Authors:  T R Gingeras; D Y Kwoh; G R Davis
Journal:  Nucleic Acids Res       Date:  1987-07-10       Impact factor: 16.971

10.  Covalent attachment of oligonucleotides to solid supports.

Authors:  S S Ghosh; G F Musso
Journal:  Nucleic Acids Res       Date:  1987-07-10       Impact factor: 16.971

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  60 in total

1.  Use of immobilized PCR primers to generate covalently immobilized DNAs for in vitro transcription/translation reactions.

Authors:  J D Andreadis; L A Chrisey
Journal:  Nucleic Acids Res       Date:  2000-01-15       Impact factor: 16.971

2.  Solid phase DNA amplification: characterisation of primer attachment and amplification mechanisms.

Authors:  C Adessi; G Matton; G Ayala; G Turcatti; J J Mermod; P Mayer; E Kawashima
Journal:  Nucleic Acids Res       Date:  2000-10-15       Impact factor: 16.971

3.  DNA probes on chip surfaces studied by scanning force microscopy using specific binding of colloidal gold.

Authors:  R Möller; A Csáki; J M Köhler; W Fritzsche
Journal:  Nucleic Acids Res       Date:  2000-10-15       Impact factor: 16.971

4.  Preparation of DNA and protein micro arrays on glass slides coated with an agarose film.

Authors:  V Afanassiev; V Hanemann; S Wölfl
Journal:  Nucleic Acids Res       Date:  2000-06-15       Impact factor: 16.971

5.  An assessment of Motorola CodeLink microarray performance for gene expression profiling applications.

Authors:  Ramesh Ramakrishnan; David Dorris; Anna Lublinsky; Allen Nguyen; Marc Domanus; Anna Prokhorova; Linn Gieser; Edward Touma; Randall Lockner; Murthy Tata; Xiaomei Zhu; Marcus Patterson; Richard Shippy; Timothy J Sendera; Abhijit Mazumder
Journal:  Nucleic Acids Res       Date:  2002-04-01       Impact factor: 16.971

6.  Expression profiling with oligonucleotide arrays: technologies and applications for neurobiology.

Authors:  Timothy J Sendera; David Dorris; Ramesh Ramakrishnan; Allen Nguyen; Dionisios Trakas; Abhijit Mazumder
Journal:  Neurochem Res       Date:  2002-10       Impact factor: 3.996

7.  Characterization of oligodeoxyribonucleotide synthesis on glass plates.

Authors:  E LeProust; H Zhang; P Yu; X Zhou; X Gao
Journal:  Nucleic Acids Res       Date:  2001-05-15       Impact factor: 16.971

8.  Validation of a novel, fully integrated and flexible microarray benchtop facility for gene expression profiling.

Authors:  Michael Baum; Simone Bielau; Nicole Rittner; Kathrin Schmid; Kathrin Eggelbusch; Michael Dahms; Andrea Schlauersbach; Harald Tahedl; Markus Beier; Ramon Güimil; Matthias Scheffler; Carsten Hermann; Jörg-Michael Funk; Anke Wixmerten; Hans Rebscher; Matthias Hönig; Claas Andreae; Daniel Büchner; Erich Moschel; Andreas Glathe; Evelyn Jäger; Marc Thom; Andreas Greil; Felix Bestvater; Frank Obermeier; Josef Burgmaier; Klaus Thome; Sigrid Weichert; Silke Hein; Tim Binnewies; Volker Foitzik; Manfred Müller; Cord Friedrich Stähler; Peer Friedrich Stähler
Journal:  Nucleic Acids Res       Date:  2003-12-01       Impact factor: 16.971

9.  Impedance-based detection of DNA sequences using a silicon transducer with PNA as the probe layer.

Authors:  A Macanovic; C Marquette; C Polychronakos; M F Lawrence
Journal:  Nucleic Acids Res       Date:  2004-01-22       Impact factor: 16.971

10.  Prioritized selection of oligodeoxyribonucleotide probes for efficient hybridization to RNA transcripts.

Authors:  Kevin J Luebke; Robert P Balog; Harold R Garner
Journal:  Nucleic Acids Res       Date:  2003-01-15       Impact factor: 16.971

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