Literature DB >> 15781880

Improved detection of prostate cancer using classification and regression tree analysis.

Mark Garzotto1, Tomasz M Beer, R Guy Hudson, Laura Peters, Yi-Ching Hsieh, Eduardo Barrera, Thomas Klein, Motomi Mori.   

Abstract

PURPOSE: To build a decision tree for patients suspected of having prostate cancer using classification and regression tree (CART) analysis. PATIENTS AND METHODS: Data were uniformly collected on 1,433 referred men with a serum prostate-specific antigen (PSA) levels of < or = 10 ng/mL who underwent a prostate biopsy. Factors analyzed included demographic, laboratory, and ultrasound data (ie, hypoechoic lesions and PSA density [PSAD]). Twenty percent of the data was randomly selected and reserved for study validation. CART analysis was performed in two steps, initially using PSA and digital rectal examination (DRE) alone and subsequently using the remaining variables.
RESULTS: CART analysis selected a PSA cutoff of more than 1.55 ng/mL for further work-up, regardless of DRE findings. CART then selected the following subgroups at risk for a positive biopsy: (1) PSAD more than 0.165 ng/mL/cc; (2) PSAD < or = 0.165 ng/mL/cc and a hypoechoic lesion; (3) PSAD < or = 0.165 ng/mL/cc, no hypoechoic lesions, age older than 55.5 years, and prostate volume < or = 44.0 cc; and (4) PSAD < or = 0.165 ng/mL/cc, no hypoechoic lesions, age older than 55.5 years, and 50.25 cc less than prostate volume < or = 80.8 cc. In the validation data set, specificity and sensitivity were 31.3% and 96.6%, respectively. Cancers that were missed by the CART were Gleason score 6 or less in 93.4% of cases. Receiver operator characteristic curve analysis showed that CART and logistic regression models had similar accuracy (area under the curve = 0.74 v 0.72, respectively).
CONCLUSION: Application of CART analysis to the prostate biopsy decision results in a significant reduction in unnecessary biopsies while retaining a high degree of sensitivity when compared with the standard of performing a biopsy of all patients with an abnormal PSA or DRE.

Entities:  

Mesh:

Year:  2005        PMID: 15781880     DOI: 10.1200/JCO.2005.11.136

Source DB:  PubMed          Journal:  J Clin Oncol        ISSN: 0732-183X            Impact factor:   44.544


  29 in total

1.  Predicting impaired glucose metabolism in women with polycystic ovary syndrome by decision tree modelling.

Authors:  M Möhlig; A Flöter; J Spranger; M O Weickert; T Schill; H W Schlösser; G Brabant; A F H Pfeiffer; J Selbig; C Schöfl
Journal:  Diabetologia       Date:  2006-09-14       Impact factor: 10.122

2.  Predicting daily outcomes in acetaminophen-induced acute liver failure patients with machine learning techniques.

Authors:  Jaime Lynn Speiser; Constantine J Karvellas; Bethany J Wolf; Dongjun Chung; David G Koch; Valerie L Durkalski
Journal:  Comput Methods Programs Biomed       Date:  2019-04-11       Impact factor: 5.428

3.  Pretreatment prediction of anemia progression by pegylated interferon alpha-2b plus ribavirin combination therapy in chronic hepatitis C infection: decision-tree analysis.

Authors:  Naoki Hiramatsu; Masayuki Kurosaki; Naoya Sakamoto; Manabu Iwasaki; Minoru Sakamoto; Yoshiyuki Suzuki; Fuminaka Sugauchi; Akihiro Tamori; Sei Kakinnuma; Kentaro Matsuura; Namiki Izumi
Journal:  J Gastroenterol       Date:  2011-06-17       Impact factor: 7.527

4.  C-reactive protein as an adverse prognostic marker for men with castration-resistant prostate cancer (CRPC): confirmatory results.

Authors:  Renee C Prins; Brooks L Rademacher; Solange Mongoue-Tchokote; Joshi J Alumkal; Julie N Graff; Kristine M Eilers; Tomasz M Beer
Journal:  Urol Oncol       Date:  2010-03-06       Impact factor: 3.498

5.  Developing screening services for colorectal cancer on Android smartphones.

Authors:  Hui-Ching Wu; Chiao-Jung Chang; Chun-Che Lin; Ming-Chang Tsai; Che-Chia Chang; Ming-Hseng Tseng
Journal:  Telemed J E Health       Date:  2014-05-21       Impact factor: 3.536

6.  Robust gene expression signature from formalin-fixed paraffin-embedded samples predicts prognosis of non-small-cell lung cancer patients.

Authors:  Yang Xie; Guanghua Xiao; Kevin R Coombes; Carmen Behrens; Luisa M Solis; Gabriela Raso; Luc Girard; Heidi S Erickson; Jack Roth; John V Heymach; Cesar Moran; Kathy Danenberg; John D Minna; Ignacio I Wistuba
Journal:  Clin Cancer Res       Date:  2011-07-08       Impact factor: 12.531

7.  Risk stratification for hospitalization in acute asthma: the CHOP classification tree.

Authors:  Chu-Lin Tsai; Sunday Clark; Carlos A Camargo
Journal:  Am J Emerg Med       Date:  2010-03-25       Impact factor: 2.469

8.  Pretreatment prediction of response to peginterferon plus ribavirin therapy in genotype 1 chronic hepatitis C using data mining analysis.

Authors:  Masayuki Kurosaki; Naoya Sakamoto; Manabu Iwasaki; Minoru Sakamoto; Yoshiyuki Suzuki; Naoki Hiramatsu; Fuminaka Sugauchi; Hiroshi Yatsuhashi; Namiki Izumi
Journal:  J Gastroenterol       Date:  2010-09-10       Impact factor: 7.527

9.  Postoperative Pneumonia is Associated with Long-Term Oncologic Outcomes of Definitive Chemoradiotherapy Followed by Salvage Esophagectomy for Esophageal Cancer.

Authors:  Masashi Takeuchi; Hirofumi Kawakubo; Shuhei Mayanagi; Kayo Yoshida; Kazumasa Fukuda; Rieko Nakamura; Koichi Suda; Norihito Wada; Hiroya Takeuchi; Yuko Kitagawa
Journal:  J Gastrointest Surg       Date:  2018-07-06       Impact factor: 3.452

10.  Development and validation of a colon cancer risk assessment tool for patients undergoing colonoscopy.

Authors:  Fay Kastrinos; John I Allen; David H Stockwell; Elena M Stoffel; Earl F Cook; Muthoka L Mutinga; Judith Balmaña; Sapna Syngal
Journal:  Am J Gastroenterol       Date:  2009-04-28       Impact factor: 10.864

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.