Literature DB >> 15749820

Transcriptional network underlying Caenorhabditis elegans vulval development.

Takao Inoue1, Minqin Wang, Ted O Ririe, Jolene S Fernandes, Paul W Sternberg.   

Abstract

The vulval development of Caenorhabditis elegans provides an opportunity to investigate genetic networks that control gene expression during organogenesis. During the fourth larval stage (L4), seven vulval cell types are produced, each of which executes a distinct gene expression program. We analyze how the expression of cell-type-specific genes is regulated. Ras and Wnt signaling pathways play major roles in generating the spatial pattern of cell types and regulate gene expression through a network of transcription factors. One transcription factor (lin-29) primarily controls the temporal expression pattern. Other transcription factors (lin-11, cog-1, and egl-38) act in combination to control cell-type-specific gene expression. The complexity of the network arises in part because of the dynamic nature of gene expression, in part because of the presence of seven cell types, and also because there are multiple regulatory paths for gene expression within each cell type.

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Year:  2005        PMID: 15749820      PMCID: PMC555976          DOI: 10.1073/pnas.0408122102

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  41 in total

1.  Groucho-mediated transcriptional repression establishes progenitor cell pattern and neuronal fate in the ventral neural tube.

Authors:  J Muhr; E Andersson; M Persson; T M Jessell; J Ericson
Journal:  Cell       Date:  2001-03-23       Impact factor: 41.582

2.  Different levels of repressor activity assign redundant and specific roles to Nkx6 genes in motor neuron and interneuron specification.

Authors:  A Vallstedt; J Muhr; A Pattyn; A Pierani; M Mendelsohn; M Sander; T M Jessell; J Ericson
Journal:  Neuron       Date:  2001-09-13       Impact factor: 17.173

3.  A homeodomain protein code specifies progenitor cell identity and neuronal fate in the ventral neural tube.

Authors:  J Briscoe; A Pierani; T M Jessell; J Ericson
Journal:  Cell       Date:  2000-05-12       Impact factor: 41.582

4.  Tissue-specific regulation of the LIM homeobox gene lin-11 during development of the Caenorhabditis elegans egg-laying system.

Authors:  Bhagwati P Gupta; Paul W Sternberg
Journal:  Dev Biol       Date:  2002-07-01       Impact factor: 3.582

5.  The Caenorhabditis elegans EGL-26 protein mediates vulval cell morphogenesis.

Authors:  Wendy Hanna-Rose; Min Han
Journal:  Dev Biol       Date:  2002-01-15       Impact factor: 3.582

6.  The ground state of the ventral appendage in Drosophila.

Authors:  F Casares; R S Mann
Journal:  Science       Date:  2001-08-24       Impact factor: 47.728

7.  The Caenorhabditis elegans heterochronic gene lin-29 coordinates the vulval-uterine-epidermal connections.

Authors:  A P Newman; T Inoue; M Wang; P W Sternberg
Journal:  Curr Biol       Date:  2000-11-30       Impact factor: 10.834

8.  Reciprocal EGF signaling back to the uterus from the induced C. elegans vulva coordinates morphogenesis of epithelia.

Authors:  C Chang; A P Newman; P W Sternberg
Journal:  Curr Biol       Date:  1999-03-11       Impact factor: 10.834

9.  Patterning of the C. elegans 1 degrees vulval lineage by RAS and Wnt pathways.

Authors:  M Wang; P W Sternberg
Journal:  Development       Date:  2000-12       Impact factor: 6.868

10.  unc-53 controls longitudinal migration in C. elegans.

Authors:  Eve Stringham; Nathalie Pujol; Joel Vandekerckhove; Thierry Bogaert
Journal:  Development       Date:  2002-07       Impact factor: 6.868

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  25 in total

1.  Time-lapse imaging and cell-specific expression profiling reveal dynamic branching and molecular determinants of a multi-dendritic nociceptor in C. elegans.

Authors:  Cody J Smith; Joseph D Watson; W Clay Spencer; Tim O'Brien; Byeong Cha; Adi Albeg; Millet Treinin; David M Miller
Journal:  Dev Biol       Date:  2010-06-09       Impact factor: 3.582

2.  A novel candidate cis-regulatory motif pair in the promoters of germline and oogenesis genes in C. elegans.

Authors:  Chaim Linhart; Yonit Halperin; Amir Darom; Shahar Kidron; Limor Broday; Ron Shamir
Journal:  Genome Res       Date:  2011-09-19       Impact factor: 9.043

Review 3.  Gene regulatory networks for development.

Authors:  Michael Levine; Eric H Davidson
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-23       Impact factor: 11.205

4.  Temporal ChIP-on-chip reveals Biniou as a universal regulator of the visceral muscle transcriptional network.

Authors:  Janus S Jakobsen; Martina Braun; Jeanette Astorga; E Hilary Gustafson; Thomas Sandmann; Michal Karzynski; Peter Carlsson; Eileen E M Furlong
Journal:  Genes Dev       Date:  2007-10-01       Impact factor: 11.361

5.  The Caenorhabditis elegans vulva: a post-embryonic gene regulatory network controlling organogenesis.

Authors:  Ted O Ririe; Jolene S Fernandes; Paul W Sternberg
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-22       Impact factor: 11.205

6.  Cis-regulatory mutations in the Caenorhabditis elegans homeobox gene locus cog-1 affect neuronal development.

Authors:  M Maggie O'Meara; Henry Bigelow; Stephane Flibotte; John F Etchberger; Donald G Moerman; Oliver Hobert
Journal:  Genetics       Date:  2009-02-02       Impact factor: 4.562

7.  Rapid sequence evolution of transcription factors controlling neuron differentiation in Caenorhabditis.

Authors:  Richard Jovelin
Journal:  Mol Biol Evol       Date:  2009-07-09       Impact factor: 16.240

8.  Multicolor labeling in developmental gene regulatory network analysis.

Authors:  Aditya J Sethi; Robert C Angerer; Lynne M Angerer
Journal:  Methods Mol Biol       Date:  2014

Review 9.  Morphogenesis of the caenorhabditis elegans vulva.

Authors:  Adam J Schindler; David R Sherwood
Journal:  Wiley Interdiscip Rev Dev Biol       Date:  2013 Jan-Feb       Impact factor: 5.814

10.  Maps of cis-Regulatory Nodes in Megabase Long Genome Segments are an Inevitable Intermediate Step Toward Whole Genome Functional Mapping.

Authors:  Lev G Nikolaev; Sergey B Akopov; Igor P Chernov; Eugene D Sverdlov
Journal:  Curr Genomics       Date:  2007-04       Impact factor: 2.236

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