Literature DB >> 15740088

Selective detection of 2-deoxyribonolactone in DNA.

Kousuke Sato1, Marc M Greenberg.   

Abstract

2-Deoxyribonolactone (L) is an oxidized abasic lesion that is produced by a variety of DNA damaging agents. It exhibits unique biological effects with respect to its proclivity to form DNA-protein cross-links and promutagenic base pairs. Recent evidence suggests that the levels of this lesion caused by oxidative stress are underestimated. We have developed a simple, selective method for detecting subpicomole amounts of L in DNA. The method takes advantage of the selective reaction of the butenolide (2) derived from beta-elimination from L with a biotinylated derivative of cysteine. This method will be useful for analyzing the levels of this oxidized abasic site in DNA.

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Year:  2005        PMID: 15740088     DOI: 10.1021/ja0426185

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  19 in total

1.  Quantification of the 2-deoxyribonolactone and nucleoside 5'-aldehyde products of 2-deoxyribose oxidation in DNA and cells by isotope-dilution gas chromatography mass spectrometry: differential effects of gamma-radiation and Fe2+-EDTA.

Authors:  Wan Chan; Bingzi Chen; Lianrong Wang; Koli Taghizadeh; Michael S Demott; Peter C Dedon
Journal:  J Am Chem Soc       Date:  2010-05-05       Impact factor: 15.419

2.  2-Deoxyribonolactone lesions in X-ray-irradiated DNA: quantitative determination by catalytic 5-methylene-2-furanone release.

Authors:  Marina Roginskaya; Yuriy Razskazovskiy; William A Bernhard
Journal:  Angew Chem Int Ed Engl       Date:  2005-09-26       Impact factor: 15.336

3.  Use of fluorescence sensors to determine that 2-deoxyribonolactone is the major alkali-labile deoxyribose lesion produced in oxidatively damaged DNA.

Authors:  Liang Xue; Marc M Greenberg
Journal:  Angew Chem Int Ed Engl       Date:  2007       Impact factor: 15.336

4.  Selective detection and quantification of oxidized abasic lesions in DNA.

Authors:  Shanta Dhar; Tetsuya Kodama; Marc M Greenberg
Journal:  J Am Chem Soc       Date:  2007-06-26       Impact factor: 15.419

5.  Facile quantification of lesions derived from 2'-deoxyguanosine in DNA.

Authors:  Liang Xue; Marc M Greenberg
Journal:  J Am Chem Soc       Date:  2007-05-11       Impact factor: 15.419

6.  A highly emissive fluorescent nucleoside that signals the activity of toxic ribosome-inactivating proteins.

Authors:  Seergazhi G Srivatsan; Nicholas J Greco; Yitzhak Tor
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

7.  Scope and mechanism of interstrand cross-link formation by the C4'-oxidized abasic site.

Authors:  Jonathan T Sczepanski; Aaron C Jacobs; Ananya Majumdar; Marc M Greenberg
Journal:  J Am Chem Soc       Date:  2009-08-12       Impact factor: 15.419

Review 8.  Investigating the biochemical impact of DNA damage with structure-based probes: abasic sites, photodimers, alkylation adducts, and oxidative lesions.

Authors:  Heidi A Dahlmann; V G Vaidyanathan; Shana J Sturla
Journal:  Biochemistry       Date:  2009-10-13       Impact factor: 3.162

9.  Pyrimidine Nucleobase Radical Reactivity in DNA and RNA.

Authors:  Marc M Greenberg
Journal:  Radiat Phys Chem Oxf Engl 1993       Date:  2016-06-07       Impact factor: 2.858

10.  Reactivity of Nucleic Acid Radicals.

Authors:  Marc M Greenberg
Journal:  Adv Phys Org Chem       Date:  2016       Impact factor: 2.833

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