Literature DB >> 15734115

Y-chromosome STR haplotype diversity in Brazilian populations.

Dario Grattapaglia1, Sergei Kalupniek, Claudia S Guimarães, Mônica A Ribeiro, Polyanna S Diener, Camila N Soares.   

Abstract

A sample of 198 unrelated males distributed among the five geopolitical regions in Brazil were typed for the minimal Y-STR haplotype composed of microsatellite loci DYS19, DYS385I/II, DYS389I, DYS389II, DYS390, DYS391, DYS392 and DYS393. Gene frequency data, gene diversity, haplotype diversity and power of discrimination were estimated. An AMOVA indicated that 99.97% of the haplotypic variation is found within regions and only a small 0.03% and non significant variation is found among the five regions (Fst=0.00031, P-value=0.43). This result suggests that a single national database of Y-STR haplotypes can be used in the quantitative assessment of matches in forensic casework in the Brazilian population. A significant haplotype diversity of 99.8% was found and 172 different haplotypes were observed in 198 chromosomes. Haplotype (14-11, 14-13-29-24-11-13-13) with five occurrences in 198 chromosomes was the most frequent in Brazil.

Mesh:

Year:  2005        PMID: 15734115     DOI: 10.1016/j.forsciint.2004.06.003

Source DB:  PubMed          Journal:  Forensic Sci Int        ISSN: 0379-0738            Impact factor:   2.395


  9 in total

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Authors:  Joyce A Martins; Jeane C Costa; Greiciane G Paneto; Raquel F Figueiredo; Leonor Gusmão; Paula Sánchez-Diz; Angel Carracedo; Regina M B Cicarelli
Journal:  Int J Legal Med       Date:  2010-06-16       Impact factor: 2.686

2.  Genetic polymorphism of 17 Y-STR loci in Han Chinese living in Lanzhou.

Authors:  Hong-Bing Sun; Xin Yang; Fei Ha; Zi-Long Zhang
Journal:  J Huazhong Univ Sci Technolog Med Sci       Date:  2013-12-13

3.  Extensive survey of 12 X-STRs reveals genetic heterogeneity among Brazilian populations.

Authors:  Elzemar Martins Ribeiro-Rodrigues; Teresinha de Jesus Brabo Ferreira Palha; Eloisa Auler Bittencourt; Andrea Ribeiro-Dos-Santos; Sidney Santos
Journal:  Int J Legal Med       Date:  2011-03-15       Impact factor: 2.686

4.  Demand for larger Y-STR reference databases in ethnic melting-pot countries: Argentina as a test case.

Authors:  Mariela Caputo; A Sala; D Corach
Journal:  Int J Legal Med       Date:  2019-02-09       Impact factor: 2.686

5.  Genetic analysis of 50 Y-STR loci in Dong, Miao, Tujia, and Yao populations from Hunan.

Authors:  Rui Feng; Yang Zhao; Shuiqin Chen; Qiong Li; Yong Fu; Lin Zhao; Yongsong Zhou; Lei Zhang; Xinglin Mei; Minghao Shi; Jianying Yin
Journal:  Int J Legal Med       Date:  2019-07-01       Impact factor: 2.686

6.  Haplotype diversity of 17 Y-str loci in an admixed population from the Brazilian Amazon.

Authors:  Pablo Abdon da Costa Francez; Luiz Patrick Vidal Ramos; Teresinha de Jesus Brabo Ferreira Palha; Sidney Emanuel Batista Dos Santos
Journal:  Genet Mol Biol       Date:  2011-12-15       Impact factor: 1.771

7.  Disclosing the genetic structure of Brazil through analysis of male lineages with highly discriminating haplotypes.

Authors:  Teresinha Palha; Leonor Gusmão; Elzemar Ribeiro-Rodrigues; João Farias Guerreiro; Andrea Ribeiro-Dos-Santos; Sidney Santos
Journal:  PLoS One       Date:  2012-07-10       Impact factor: 3.240

8.  Sub-Saharan Africa descendents in Rio de Janeiro (Brazil): population and mutational data for 12 Y-STR loci.

Authors:  Patricia Mariana Domingues; Leonor Gusmão; Dayse Aparecida da Silva; António Amorim; Rinaldo W Pereira; Elizeu F de Carvalho
Journal:  Int J Legal Med       Date:  2007-03-02       Impact factor: 2.791

Review 9.  CCR5Δ32 in Brazil: Impacts of a European Genetic Variant on a Highly Admixed Population.

Authors:  Bruna Kulmann-Leal; Joel Henrique Ellwanger; José Artur Bogo Chies
Journal:  Front Immunol       Date:  2021-12-10       Impact factor: 7.561

  9 in total

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