Literature DB >> 15728575

Functional relevance of amino acid residues involved in interactions with ordered nucleic acid in a spherical virus.

Juan Reguera1, Esther Grueso, Aura Carreira, Cristina Sánchez-Martínez, José M Almendral, Mauricio G Mateu.   

Abstract

In the spherical virion of the parvovirus minute virus of mice, several amino acid side chains of the capsid were previously found to be involved in interactions with the viral single-stranded DNA molecule. We have individually truncated by mutation to alanine many (ten) of these side chains and analyzed the effects on capsid assembly, stability and conformation, viral DNA encapsidation, and virion infectivity. Mutation of residues Tyr-270, Asp-273, or Asp-474 led to a drastic reduction in infectivity. Mutant Y270A was defective in capsid assembly; mutant D273A formed stable capsids, but it was essentially unable to encapsidate the viral DNA or to externalize the N terminus of the capsid protein VP2, a connected conformational event. Mutation of residues Asp-58, Trp-60, Asn-183, Thr-267, or Lys-471 led to a moderate reduction in infectivity. None of these mutations had an effect on capsid assembly or stability, or on the DNA encapsidation process. However, those five mutant virions were substantially less stable than the parental virion in thermal inactivation assays. The results with this model spherical virus indicate that several capsid residues that are found to be involved in polar interactions or multiple hydrophobic contacts with the viral DNA molecule contribute to preserving the active conformation of the infectious viral particle. Their effect appears to be mediated by the non-covalent interactions they establish with the viral DNA. In addition, at least one acidic residue at each DNA-binding region is needed for DNA packaging.

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Year:  2005        PMID: 15728575     DOI: 10.1074/jbc.M500867200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  13 in total

1.  Manipulation of the mechanical properties of a virus by protein engineering.

Authors:  Carolina Carrasco; Milagros Castellanos; Pedro J de Pablo; Mauricio G Mateu
Journal:  Proc Natl Acad Sci U S A       Date:  2008-03-11       Impact factor: 11.205

2.  Mechanical elasticity as a physical signature of conformational dynamics in a virus particle.

Authors:  Milagros Castellanos; Rebeca Pérez; Carolina Carrasco; Mercedes Hernando-Pérez; Julio Gómez-Herrero; Pedro J de Pablo; Mauricio G Mateu
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-12       Impact factor: 11.205

3.  Structural characterization of H-1 parvovirus: comparison of infectious virions to empty capsids.

Authors:  Sujata Halder; Hyun-Joo Nam; Lakshmanan Govindasamy; Michèle Vogel; Christiane Dinsart; Nathalie Salomé; Robert McKenna; Mavis Agbandje-McKenna
Journal:  J Virol       Date:  2013-02-28       Impact factor: 5.103

4.  Heparin binding induces conformational changes in Adeno-associated virus serotype 2.

Authors:  Hazel C Levy; Valorie D Bowman; Lakshmanan Govindasamy; Robert McKenna; Kevin Nash; Kenneth Warrington; Weijun Chen; Nicholas Muzyczka; Xiaodong Yan; Timothy S Baker; Mavis Agbandje-McKenna
Journal:  J Struct Biol       Date:  2008-12-13       Impact factor: 2.867

5.  Evolution to pathogenicity of the parvovirus minute virus of mice in immunodeficient mice involves genetic heterogeneity at the capsid domain that determines tropism.

Authors:  Alberto López-Bueno; José C Segovia; Juan A Bueren; M Gerard O'Sullivan; Feng Wang; Peter Tattersall; José M Almendral
Journal:  J Virol       Date:  2007-11-28       Impact factor: 5.103

6.  Impact of Natural or Synthetic Singletons in the Capsid of Human Bocavirus 1 on Particle Infectivity and Immunoreactivity.

Authors:  Julia Fakhiri; Kai-Philipp Linse; Mario Mietzsch; Man Xu; Marc A Schneider; Michael Meister; Oliver Schildgen; Paul Schnitzler; Maria Soderlund-Venermo; Mavis Agbandje-McKenna; Dirk Grimm
Journal:  J Virol       Date:  2020-05-18       Impact factor: 5.103

7.  DNA-mediated anisotropic mechanical reinforcement of a virus.

Authors:  C Carrasco; A Carreira; I A T Schaap; P A Serena; J Gómez-Herrero; M G Mateu; P J de Pablo
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-30       Impact factor: 11.205

8.  SAT2 Foot-and-Mouth Disease Virus Structurally Modified for Increased Thermostability.

Authors:  Katherine A Scott; Abhay Kotecha; Julian Seago; Jingshan Ren; Elizabeth E Fry; David I Stuart; Bryan Charleston; Francois F Maree
Journal:  J Virol       Date:  2017-04-28       Impact factor: 6.549

Review 9.  The adenovirus genome contributes to the structural stability of the virion.

Authors:  Bratati Saha; Carmen M Wong; Robin J Parks
Journal:  Viruses       Date:  2014-09-24       Impact factor: 5.048

10.  Analysis of SAT type foot-and-mouth disease virus capsid proteins and the identification of putative amino acid residues affecting virus stability.

Authors:  Francois F Maree; Belinda Blignaut; Tjaart A P de Beer; Elizabeth Rieder
Journal:  PLoS One       Date:  2013-05-22       Impact factor: 3.240

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