Literature DB >> 15725056

DNA methylation and epigenetics.

Judith Bender1.   

Abstract

In many eukaryotes, including plants, DNA methylation provides a heritable mark that guides formation of transcriptionally silent heterochromatin. In plants, aberrant RNA signals direct DNA methylation to target sequences, sometimes appropriately and sometimes inappropriately. This chapter discusses the generation of RNA signals for epigenetic changes, the factors that mediate those changes, and some of the consequences of those changes for plant gene expression and genome integrity.

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Year:  2004        PMID: 15725056     DOI: 10.1146/annurev.arplant.55.031903.141641

Source DB:  PubMed          Journal:  Annu Rev Plant Biol        ISSN: 1543-5008            Impact factor:   26.379


  113 in total

1.  X-ray absorption spectroscopy structural investigation of early intermediates in the mechanism of DNA repair by human ABH2.

Authors:  Nitai Charan Giri; Hong Sun; Haobin Chen; Max Costa; Michael J Maroney
Journal:  Biochemistry       Date:  2011-05-11       Impact factor: 3.162

Review 2.  RNA-directed DNA methylation: mechanisms and functions.

Authors:  Magdy M Mahfouz
Journal:  Plant Signal Behav       Date:  2010-07-01

3.  A DEMETER-like DNA demethylase governs tomato fruit ripening.

Authors:  Ruie Liu; Alexandre How-Kit; Linda Stammitti; Emeline Teyssier; Dominique Rolin; Anne Mortain-Bertrand; Stefanie Halle; Mingchun Liu; Junhua Kong; Chaoqun Wu; Charlotte Degraeve-Guibault; Natalie H Chapman; Mickael Maucourt; T Charlie Hodgman; Jörg Tost; Mondher Bouzayen; Yiguo Hong; Graham B Seymour; James J Giovannoni; Philippe Gallusci
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-10       Impact factor: 11.205

4.  The transcribed 165-bp CentO satellite is the major functional centromeric element in the wild rice species Oryza punctata.

Authors:  Wenli Zhang; Chuandeng Yi; Weidong Bao; Bin Liu; Jiajun Cui; Hengxiu Yu; Xiaofeng Cao; Minghong Gu; Min Liu; Zhukuan Cheng
Journal:  Plant Physiol       Date:  2005-08-19       Impact factor: 8.340

5.  Genome-wide mapping of 5-hydroxymethylcytosine in three rice cultivars reveals its preferential localization in transcriptionally silent transposable element genes.

Authors:  Xi-liang Wang; Shu-hui Song; Yong-Sheng Wu; Yu-Li Li; Ting-ting Chen; Zhi-yuan Huang; Shuo Liu; Thomas L Dunwell; Gerd P Pfeifer; Jim M Dunwell; Raheema Wamaedeesa; Ihsan Ullah; Yinsheng Wang; Song-nian Hu
Journal:  J Exp Bot       Date:  2015-08-13       Impact factor: 6.992

6.  ROR1/RPA2A, a putative replication protein A2, functions in epigenetic gene silencing and in regulation of meristem development in Arabidopsis.

Authors:  Ran Xia; Junguo Wang; Chunyan Liu; Yu Wang; Youqun Wang; Jixian Zhai; Jun Liu; Xuhui Hong; Xiaofeng Cao; Jian-Kang Zhu; Zhizhong Gong
Journal:  Plant Cell       Date:  2005-12-02       Impact factor: 11.277

7.  Relationship between allelic state of T-DNA and DNA methylation of chromosomal integration region in transformed Arabidopsis thaliana plants.

Authors:  Frédéric G Masclaux; Rafael Pont-Lezica; Jean-Philippe Galaud
Journal:  Plant Mol Biol       Date:  2005-06       Impact factor: 4.076

Review 8.  From early homologue recognition to synaptonemal complex formation.

Authors:  Denise Zickler
Journal:  Chromosoma       Date:  2006-03-29       Impact factor: 4.316

9.  Epigenetic inheritance in rice plants.

Authors:  Keiko Akimoto; Hatsue Katakami; Hyun-Jung Kim; Emiko Ogawa; Cecile M Sano; Yuko Wada; Hiroshi Sano
Journal:  Ann Bot       Date:  2007-06-18       Impact factor: 4.357

10.  ROS3 is an RNA-binding protein required for DNA demethylation in Arabidopsis.

Authors:  Xianwu Zheng; Olga Pontes; Jianhua Zhu; Daisuke Miki; Fei Zhang; Wen-Xue Li; Kei Iida; Avnish Kapoor; Craig S Pikaard; Jian-Kang Zhu
Journal:  Nature       Date:  2008-09-24       Impact factor: 49.962

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