Literature DB >> 15721608

EPR techniques for studying radical enzymes.

G Jeschke1.   

Abstract

EPR studies on radical enzymes are reviewed under the aspects of the information that they can provide and of the techniques that are used. An overview of organic radicals derived from amino acids, modified amino acids, and cofactors is given and g tensor data are compiled. The information accessible from a spectroscopic point of view is contrasted with the information required to understand enzyme structure and function, and some precautions are discussed that must be taken to derive the latter kind of information from the former. Structural dynamics is identified as an aspect that has rarely been addressed in the past although it is highly relevant for enzyme function. It is proposed that techniques introduced recently on other classes of proteins could help to close this gap.

Mesh:

Substances:

Year:  2005        PMID: 15721608     DOI: 10.1016/j.bbabio.2004.02.012

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  14 in total

1.  An oxyferrous heme/protein-based radical intermediate is catalytically competent in the catalase reaction of Mycobacterium tuberculosis catalase-peroxidase (KatG).

Authors:  Javier Suarez; Kalina Ranguelova; Andrzej A Jarzecki; Julia Manzerova; Vladimir Krymov; Xiangbo Zhao; Shengwei Yu; Leonid Metlitsky; Gary J Gerfen; Richard S Magliozzo
Journal:  J Biol Chem       Date:  2009-01-12       Impact factor: 5.157

2.  Measuring nanometer distances in nucleic acids using a sequence-independent nitroxide probe.

Authors:  Peter Z Qin; Ian S Haworth; Qi Cai; Ana K Kusnetzow; Gian Paola G Grant; Eric A Price; Glenna Z Sowa; Anna Popova; Bruno Herreros; Honghang He
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

3.  Imaging of Enzyme Activity by Electron Paramagnetic Resonance: Concept and Experiment Using a Paramagnetic Substrate of Alkaline Phosphatase.

Authors:  Urikhan Sanzhaeva; Xuan Xu; Priyaankadevi Guggilapu; Mark Tseytlin; Valery V Khramtsov; Benoit Driesschaert
Journal:  Angew Chem Int Ed Engl       Date:  2018-08-07       Impact factor: 15.336

4.  Nanometer distance measurements in RNA using site-directed spin labeling.

Authors:  Qi Cai; Ana Karin Kusnetzow; Kálmán Hideg; Eric A Price; Ian S Haworth; Peter Z Qin
Journal:  Biophys J       Date:  2007-05-25       Impact factor: 4.033

5.  On the Track of Long-Range Electron Transfer in B-Type Dye-Decolorizing Peroxidases: Identification of a Tyrosyl Radical by Computational Prediction and Electron Paramagnetic Resonance Spectroscopy.

Authors:  Kevin Nys; Paul Georg Furtmüller; Christian Obinger; Sabine Van Doorslaer; Vera Pfanzagl
Journal:  Biochemistry       Date:  2021-03-30       Impact factor: 3.321

6.  Site-directed spin labeling measurements of nanometer distances in nucleic acids using a sequence-independent nitroxide probe.

Authors:  Qi Cai; Ana Karin Kusnetzow; Wayne L Hubbell; Ian S Haworth; Gian Paola C Gacho; Ned Van Eps; Kálmán Hideg; Eric J Chambers; Peter Z Qin
Journal:  Nucleic Acids Res       Date:  2006-09-10       Impact factor: 16.971

7.  Base-specific spin-labeling of RNA for structure determination.

Authors:  Nelly Piton; Yuguang Mu; Gerhard Stock; Thomas F Prisner; Olav Schiemann; Joachim W Engels
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971

Review 8.  How can EPR spectroscopy help to unravel molecular mechanisms of flavin-dependent photoreceptors?

Authors:  Daniel Nohr; Ryan Rodriguez; Stefan Weber; Erik Schleicher
Journal:  Front Mol Biosci       Date:  2015-09-01

9.  Catalytic surface radical in dye-decolorizing peroxidase: a computational, spectroscopic and site-directed mutagenesis study.

Authors:  Dolores Linde; Rebecca Pogni; Marina Cañellas; Fátima Lucas; Victor Guallar; Maria Camilla Baratto; Adalgisa Sinicropi; Verónica Sáez-Jiménez; Cristina Coscolín; Antonio Romero; Francisco Javier Medrano; Francisco J Ruiz-Dueñas; Angel T Martínez
Journal:  Biochem J       Date:  2015-03-01       Impact factor: 3.857

10.  Rapid Freeze-Quench EPR Spectroscopy: Improved Collection of Frozen Particles.

Authors:  Faezeh Nami; Peter Gast; Edgar J J Groenen
Journal:  Appl Magn Reson       Date:  2016-04-30       Impact factor: 0.831

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.