Literature DB >> 15718461

Entropically driven helix formation.

Yehuda Snir1, Randall D Kamien.   

Abstract

The helix is a ubiquitous motif for biopolymers. We propose a heuristic, entropically based model that predicts helix formation in a system of hard spheres and semiflexible tubes. We find that the entropy of the spheres is maximized when short stretches of the tube form a helix with a geometry close to that found in natural helices. Our model could be directly tested with wormlike micelles as the tubes, and the effect could be used to self-assemble supramolecular helices.

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Year:  2005        PMID: 15718461     DOI: 10.1126/science.1106243

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  19 in total

1.  Translational-entropy gain of solvent upon protein folding.

Authors:  Yuichi Harano; Masahiro Kinoshita
Journal:  Biophys J       Date:  2005-07-29       Impact factor: 4.033

2.  Entropy-driven genome organization.

Authors:  Davide Marenduzzo; Cristian Micheletti; Peter R Cook
Journal:  Biophys J       Date:  2006-02-24       Impact factor: 4.033

3.  Helices.

Authors:  Nadia Chouaieb; Alain Goriely; John H Maddocks
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-12       Impact factor: 11.205

4.  Structural motifs of biomolecules.

Authors:  Jayanth R Banavar; Trinh Xuan Hoang; John H Maddocks; Amos Maritan; Chiara Poletto; Andrzej Stasiak; Antonio Trovato
Journal:  Proc Natl Acad Sci U S A       Date:  2007-10-24       Impact factor: 11.205

5.  Light-controlled self-assembly of reversible and irreversible nanoparticle suprastructures.

Authors:  Rafal Klajn; Kyle J M Bishop; Bartosz A Grzybowski
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-11       Impact factor: 11.205

6.  Crowded, cell-like environment induces shape changes in aspherical protein.

Authors:  Dirar Homouz; Michael Perham; Antonios Samiotakis; Margaret S Cheung; Pernilla Wittung-Stafshede
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-12       Impact factor: 11.205

7.  Macromolecular crowding modulates folding mechanism of alpha/beta protein apoflavodoxin.

Authors:  Dirar Homouz; Loren Stagg; Pernilla Wittung-Stafshede; Margaret S Cheung
Journal:  Biophys J       Date:  2009-01       Impact factor: 4.033

8.  Hierarchical self-assembly of chiral fibres from achiral particles.

Authors:  P Prybytak; W J Frith; D J Cleaver
Journal:  Interface Focus       Date:  2012-03-28       Impact factor: 3.906

Review 9.  Macromolecular crowding and confinement: biochemical, biophysical, and potential physiological consequences.

Authors:  Huan-Xiang Zhou; Germán Rivas; Allen P Minton
Journal:  Annu Rev Biophys       Date:  2008       Impact factor: 12.981

10.  Ground-state properties of tubelike flexible polymers.

Authors:  T Vogel; T Neuhaus; M Bachmann; W Janke
Journal:  Eur Phys J E Soft Matter       Date:  2009-09-24       Impact factor: 1.890

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