Literature DB >> 15718138

Bumps in the road: how replicative DNA polymerases see DNA damage.

Matthew Hogg1, Susan S Wallace, Sylvie Doublié.   

Abstract

Significant advances have been made recently in the study of polymerases. First came the realization that there are many more DNA polymerases than originally thought; indeed, no fewer than 14 template-dependent DNA polymerases are found in mammals. Concurrent structural studies of DNA polymerases bound to DNA and incoming nucleotide have revealed how these remarkable copying machines select the correct deoxynucleoside triphosphate among a sea of nucleotides. A whole new level of insight into DNA replication fidelity has been reached as a result of recently determined crystal structures of DNA lesions in the context of the active sites of repair, replicative and specialized DNA polymerases. These structures illustrate why some lesions can be bypassed readily, whereas others are strong blocks to DNA replication.

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Year:  2005        PMID: 15718138     DOI: 10.1016/j.sbi.2005.01.014

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  19 in total

1.  Replication of the 2,6-diamino-4-hydroxy-N(5)-(methyl)-formamidopyrimidine (MeFapy-dGuo) adduct by eukaryotic DNA polymerases.

Authors:  Plamen P Christov; Kinrin Yamanaka; Jeong-Yun Choi; Kei-ichi Takata; Richard D Wood; F Peter Guengerich; R Stephen Lloyd; Carmelo J Rizzo
Journal:  Chem Res Toxicol       Date:  2012-07-06       Impact factor: 3.739

Review 2.  DNA glycosylases search for and remove oxidized DNA bases.

Authors:  Susan S Wallace
Journal:  Environ Mol Mutagen       Date:  2013-10-07       Impact factor: 3.216

3.  Improving cancer therapy by combining cell biological, physical, and molecular targeting strategies.

Authors:  Jac A Nickoloff
Journal:  Chin J Cancer Res       Date:  2013-02       Impact factor: 5.087

4.  Kinetics, structure, and mechanism of 8-Oxo-7,8-dihydro-2'-deoxyguanosine bypass by human DNA polymerase η.

Authors:  Amritraj Patra; Leslie D Nagy; Qianqian Zhang; Yan Su; Livia Müller; F Peter Guengerich; Martin Egli
Journal:  J Biol Chem       Date:  2014-04-23       Impact factor: 5.157

Review 5.  DNA polymerases provide a canon of strategies for translesion synthesis past oxidatively generated lesions.

Authors:  Karl E Zahn; Susan S Wallace; Sylvie Doublié
Journal:  Curr Opin Struct Biol       Date:  2011-04-07       Impact factor: 6.809

Review 6.  Mechanistic and biological aspects of helicase action on damaged DNA.

Authors:  Avvaru N Suhasini; Robert M Brosh
Journal:  Cell Cycle       Date:  2010-06-15       Impact factor: 4.534

7.  Mechanistic Studies with DNA Polymerases Reveal Complex Outcomes following Bypass of DNA Damage.

Authors:  Robert L Eoff; Jeong-Yun Choi; F Peter Guengerich
Journal:  J Nucleic Acids       Date:  2010-09-26

Review 8.  The molecular mechanisms and physiological consequences of oxidative stress: lessons from a model bacterium.

Authors:  James A Imlay
Journal:  Nat Rev Microbiol       Date:  2013-05-28       Impact factor: 60.633

9.  DNA damage alters DNA polymerase delta to a form that exhibits increased discrimination against modified template bases and mismatched primers.

Authors:  Xiao Meng; Yajing Zhou; Sufang Zhang; Ernest Y C Lee; David N Frick; Marietta Y W T Lee
Journal:  Nucleic Acids Res       Date:  2008-12-11       Impact factor: 16.971

10.  Restriction enzyme-free mutagenesis via the light regulation of DNA polymerization.

Authors:  Douglas D Young; Hrvoje Lusic; Mark O Lively; Alexander Deiters
Journal:  Nucleic Acids Res       Date:  2009-03-17       Impact factor: 16.971

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