Literature DB >> 15714317

Alteration of the embryo transcriptome of hexaploid winter wheat (Triticum aestivum cv. Mercia) during maturation and germination.

Ian D Wilson1, Gary L A Barker, Chungui Lu, Jane A Coghill, Richard W Beswick, John R Lenton, Keith J Edwards.   

Abstract

Grain dormancy and germination are areas of biology that are of considerable interest to the cereal community. We have used a 9,155-feature wheat unigene cDNA microarray resource to investigate changes in the wheat embryo transcriptome during late grain development and maturation and during the first 48 h of postimbibition germination. In the embryo 392 mRNAs accumulated by twofold or greater over the time course from 21 days postanthesis (dpa) to 40 dpa and on through 1 and 2 days postgermination. These included mRNAs encoding proteins involved in amino acid biosynthesis and metabolism, cell division and subsequent cell development, signal transduction, lipid metabolism, energy production, protein turnover, respiration, initiation of transcription, initiation of translation and ribosomal composition. A number of mRNAs encoding proteins of unknown function also accumulated over the time course. Conversely 163 sequences showed decreases of twofold or greater over the time course. A small number of mRNAs also showed rapid accumulation specifically during the first 48 h of germination. We also examined alterations in the accumulation of transcripts encoding proteins involved in abscisic acid signalling. Thus, we describe changes in the level of transcripts encoding wheat Viviparous 1 (Vp1) and other interacting proteins. Interestingly, the transcript encoding wheat Viviparous-interacting protein 1 showed a pattern of accumulation that correlates inversely with germination. Our data suggests that the majority of the transcripts required for germination accumulate in the embryo prior to germination and we discuss the implications of these findings with regard to manipulation of germination in wheat.

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Year:  2005        PMID: 15714317     DOI: 10.1007/s10142-005-0137-2

Source DB:  PubMed          Journal:  Funct Integr Genomics        ISSN: 1438-793X            Impact factor:   3.410


  42 in total

Review 1.  Stored proteinases and the initiation of storage protein mobilization in seeds during germination and seedling growth.

Authors:  K Müntz; M A Belozersky; Y E Dunaevsky; A Schlereth; J Tiedemann
Journal:  J Exp Bot       Date:  2001-09       Impact factor: 6.992

2.  Specific oxidative cleavage of carotenoids by VP14 of maize.

Authors:  S H Schwartz; B C Tan; D A Gage; J A Zeevaart; D R McCarty
Journal:  Science       Date:  1997-06-20       Impact factor: 47.728

3.  Identification and analysis of proteins that interact with the Avena fatua homologue of the maize transcription factor VIVIPAROUS 1.

Authors:  H D Jones; S Kurup; N C Peters; M J Holdsworth
Journal:  Plant J       Date:  2000-01       Impact factor: 6.417

4.  Genotype and environment interact to control dormancy and differential expression of the VIVIPAROUS 1 homologue in embryos of Avena fatua.

Authors:  H D Jones; N C Peters; M J Holdsworth
Journal:  Plant J       Date:  1997-10       Impact factor: 6.417

5.  Microarray analysis of developing Arabidopsis seeds.

Authors:  T Girke; J Todd; S Ruuska; J White; C Benning; J Ohlrogge
Journal:  Plant Physiol       Date:  2000-12       Impact factor: 8.340

6.  Different functions of vicilin and legumin are reflected in the histopattern of globulin mobilization during germination of vetch (Vicia sativa L.).

Authors:  J Tiedemann; B Neubohn; K Müntz
Journal:  Planta       Date:  2000-06       Impact factor: 4.116

7.  SKP1 connects cell cycle regulators to the ubiquitin proteolysis machinery through a novel motif, the F-box.

Authors:  C Bai; P Sen; K Hofmann; L Ma; M Goebl; J W Harper; S J Elledge
Journal:  Cell       Date:  1996-07-26       Impact factor: 41.582

8.  Sequence and functional analyses of the rice gene homologous to the maize Vp1.

Authors:  T Hattori; T Terada; S T Hamasuna
Journal:  Plant Mol Biol       Date:  1994-03       Impact factor: 4.076

9.  The Viviparous-1 developmental gene of maize encodes a novel transcriptional activator.

Authors:  D R McCarty; T Hattori; C B Carson; V Vasil; M Lazar; I K Vasil
Journal:  Cell       Date:  1991-09-06       Impact factor: 41.582

10.  A transcriptomics resource for wheat functional genomics.

Authors:  Ian D Wilson; Gary L A Barker; Richard W Beswick; Sophie K Shepherd; Chungui Lu; Jane A Coghill; David Edwards; Philippa Owen; Rebecca Lyons; Jill S Parker; John R Lenton; Michael J Holdsworth; Peter R Shewry; Keith J Edwards
Journal:  Plant Biotechnol J       Date:  2004-11       Impact factor: 9.803

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  19 in total

1.  Identification of a protein network interacting with TdRF1, a wheat RING ubiquitin ligase with a protective role against cellular dehydration.

Authors:  Davide Guerra; Anna Maria Mastrangelo; Gema Lopez-Torrejon; Stephan Marzin; Patrick Schweizer; Antonio Michele Stanca; Juan Carlos del Pozo; Luigi Cattivelli; Elisabetta Mazzucotelli
Journal:  Plant Physiol       Date:  2011-12-13       Impact factor: 8.340

2.  Expression dynamics of metabolic and regulatory components across stages of panicle and seed development in indica rice.

Authors:  Rita Sharma; Pinky Agarwal; Swatismita Ray; Priyanka Deveshwar; Pooja Sharma; Niharika Sharma; Aashima Nijhawan; Mukesh Jain; Ashok Kumar Singh; Vijay Pal Singh; Jitendra Paul Khurana; Akhilesh Kumar Tyagi; Sanjay Kapoor
Journal:  Funct Integr Genomics       Date:  2012-03-31       Impact factor: 3.410

Review 3.  Plant transcriptomics and responses to environmental stress: an overview.

Authors:  Sameen Ruqia Imadi; Alvina Gul Kazi; Mohammad Abass Ahanger; Salih Gucel; Parvaiz Ahmad
Journal:  J Genet       Date:  2015-09       Impact factor: 1.166

4.  The E3 ubiquitin ligase WVIP2 highlights the versatility of protein ubiquitination.

Authors:  Davide Guerra; Luigi Cattivelli; Elisabetta Mazzucotelli
Journal:  Plant Signal Behav       Date:  2012-08-17

Review 5.  Wheat grain preharvest sprouting and late maturity alpha-amylase.

Authors:  Daryl J Mares; Kolumbina Mrva
Journal:  Planta       Date:  2014-09-26       Impact factor: 4.116

6.  Transcriptome analysis during seed germination of elite Chinese bread wheat cultivar Jimai 20.

Authors:  Yonglong Yu; Guangfang Guo; Dongwen Lv; Yingkao Hu; Jiarui Li; Xiaohui Li; Yueming Yan
Journal:  BMC Plant Biol       Date:  2014-01-13       Impact factor: 4.215

7.  F-box proteins in rice. Genome-wide analysis, classification, temporal and spatial gene expression during panicle and seed development, and regulation by light and abiotic stress.

Authors:  Mukesh Jain; Aashima Nijhawan; Rita Arora; Pinky Agarwal; Swatismita Ray; Pooja Sharma; Sanjay Kapoor; Akhilesh K Tyagi; Jitendra P Khurana
Journal:  Plant Physiol       Date:  2007-02-09       Impact factor: 8.340

8.  A wheat homolog of MOTHER OF FT AND TFL1 acts in the regulation of germination.

Authors:  Shingo Nakamura; Fumitaka Abe; Hiroyuki Kawahigashi; Kou Nakazono; Akemi Tagiri; Takashi Matsumoto; Shigeko Utsugi; Taiichi Ogawa; Hirokazu Handa; Hiroki Ishida; Masahiko Mori; Kanako Kawaura; Yasunari Ogihara; Hideho Miura
Journal:  Plant Cell       Date:  2011-09-06       Impact factor: 11.277

9.  Mapping metabolic and transcript temporal switches during germination in rice highlights specific transcription factors and the role of RNA instability in the germination process.

Authors:  Katharine A Howell; Reena Narsai; Adam Carroll; Aneta Ivanova; Marc Lohse; Björn Usadel; A Harvey Millar; James Whelan
Journal:  Plant Physiol       Date:  2008-12-12       Impact factor: 8.340

10.  Assessment of adaptive evolution between wheat and rice as deduced from full-length common wheat cDNA sequence data and expression patterns.

Authors:  Kanako Kawaura; Keiichi Mochida; Akiko Enju; Yasushi Totoki; Atsushi Toyoda; Yoshiyuki Sakaki; Chikatoshi Kai; Jun Kawai; Yoshihide Hayashizaki; Motoaki Seki; Kazuo Shinozaki; Yasunari Ogihara
Journal:  BMC Genomics       Date:  2009-06-18       Impact factor: 3.969

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