Literature DB >> 15713085

Biomolecule-based switching devices that respond inversely to thermal stimuli.

Ryu Tashiro1, Hiroshi Sugiyama.   

Abstract

We demonstrate a molecular switch, on the basis of the characteristic properties of DNA and RNA, which indicates a completely inverted response to thermal stimuli using the transition between right- and left-handed helices. We designed a system using aminopurine (Ap), which can convert the pi-stack information of the transition from right-handed to left-handed DNA (B-Z transition) and RNA (A-Z transition) into an output giving a fluorescent signal. These two biomolecular devices together serve as "right-left" or "off-on" switches. When the temperature is changed from low to high, the RNA device changes from the off to on signal; however, the DNA device changes from on to off. The response of these RNA and DNA based devices against thermal stimulus was completely reversible.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 15713085     DOI: 10.1021/ja044138j

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  9 in total

1.  The transition between the B and Z conformations of DNA investigated by targeted molecular dynamics simulations with explicit solvation.

Authors:  Mika A Kastenholz; Thomas U Schwartz; Philippe H Hünenberger
Journal:  Biophys J       Date:  2006-10-15       Impact factor: 4.033

2.  Electrically induced conformational change of peptides on metallic nanosurfaces.

Authors:  Yi Chen; Eduardo R Cruz-Chu; Jaie C Woodard; Manas R Gartia; Klaus Schulten; Logan Liu
Journal:  ACS Nano       Date:  2012-08-21       Impact factor: 15.881

3.  Studying Z-DNA and B- to Z-DNA transitions using a cytosine analogue FRET-pair.

Authors:  Blaise Dumat; Anders Foller Larsen; L Marcus Wilhelmsson
Journal:  Nucleic Acids Res       Date:  2016-02-20       Impact factor: 16.971

4.  Chiroptical detection of condensed nickel(II)-Z-DNA in the presence of the B-DNA via porphyrin exciton coupled circular dichroism.

Authors:  Jung Kyu Choi; Gevorg Sargsyan; Murtaza Shabbir-Hussain; Andrea E Holmes; Milan Balaz
Journal:  J Phys Chem B       Date:  2011-08-03       Impact factor: 2.991

5.  A multi-stimuli responsive switch as a fluorescent molecular analogue of transistors.

Authors:  Iluminada Gallardo; Gonzalo Guirado; Jordi Hernando; Sandy Morais; Gemma Prats
Journal:  Chem Sci       Date:  2015-11-19       Impact factor: 9.825

Review 6.  Chiroptical switches: applications in sensing and catalysis.

Authors:  Zhaohua Dai; Jennifer Lee; Wenyao Zhang
Journal:  Molecules       Date:  2012-01-31       Impact factor: 4.411

7.  Base extrusion is found at helical junctions between right- and left-handed forms of DNA and RNA.

Authors:  Doyoun Kim; Sanjith Reddy; Dong Young Kim; Alexander Rich; Sangho Lee; Kyeong Kyu Kim; Yang-Gyun Kim
Journal:  Nucleic Acids Res       Date:  2009-05-21       Impact factor: 16.971

8.  Enzyme-Operated DNA-Based Nanodevices.

Authors:  Erica Del Grosso; Anne-Marie Dallaire; Alexis Vallée-Bélisle; Francesco Ricci
Journal:  Nano Lett       Date:  2015-11-25       Impact factor: 11.189

Review 9.  Dynamics Studies of DNA with Non-canonical Structure Using NMR Spectroscopy.

Authors:  Kwang-Im Oh; Jinwoo Kim; Chin-Ju Park; Joon-Hwa Lee
Journal:  Int J Mol Sci       Date:  2020-04-11       Impact factor: 5.923

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.