Literature DB >> 15709727

Rigid-rod molecules in biomembrane models: from hydrogen-bonded chains to synthetic multifunctional pores.

Naomi Sakai1, Jiri Mareda, Stefan Matile.   

Abstract

Synthetic ion channels and pores formed by rigid-rod molecules are summarized. This includes work on hydrogen-bonded chains installed along membrane-spanning rigid-rod scaffolds to transport protons. As a second topic, programmed assembly of p-septiphenyls with terminal iminodiacetate-copper complexes for potassium transport by cation-pi interactions is described. The third topic concerns rigid push-pull rods as fluorescent alpha-helix mimics to probe the importance of dipole-potential interactions for voltage gating, both on the functional and the structural level. Topic number four deals with p-octiphenyl staves as key scaffolds for the synthesis of rigid-rod beta-barrel pores. The description of internal and external design strategies for these rigid-rod beta-barrels covers a rich collection of pH-, pM-, voltage-, ligand-, and enzyme-gated synthetic multifunctional pores that can act as hosts, sensors, and catalysts. As far as practical applications are concerned, the possibility to detect chemical reactions with synthetic multifunctional pores appears most attractive. Recent molecular mechanics simulations are presented as a valuable approach to insights on the elusive suprastructures of multifunctional pores made from rigid rods.

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Year:  2005        PMID: 15709727     DOI: 10.1021/ar0400802

Source DB:  PubMed          Journal:  Acc Chem Res        ISSN: 0001-4842            Impact factor:   22.384


  16 in total

1.  Nanometer-sized amino acids for the synthesis of nanometer-scale water-soluble molecular rods of precise length.

Authors:  Chris M Gothard; Nosheen A Rao; James S Nowick
Journal:  J Am Chem Soc       Date:  2007-05-16       Impact factor: 15.419

2.  Coordination and transport of alkali metal cations through phospholipid bilayer membranes by hydraphile channels.

Authors:  George W Gokel; Megan Michele Daschbach
Journal:  Coord Chem Rev       Date:  2008-04       Impact factor: 22.315

3.  Metal-assisted channel stabilization: disposition of a single histidine on the N-terminus of alamethicin yields channels with extraordinarily long lifetimes.

Authors:  Daisuke Noshiro; Koji Asami; Shiroh Futaki
Journal:  Biophys J       Date:  2010-05-19       Impact factor: 4.033

4.  Membrane-dependent oligomeric structure and pore formation of a beta-hairpin antimicrobial peptide in lipid bilayers from solid-state NMR.

Authors:  Rajeswari Mani; Sarah D Cady; Ming Tang; Alan J Waring; Robert I Lehrer; Mei Hong
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-23       Impact factor: 11.205

5.  Functionalized analogues of an unnatural amino acid that mimics a tripeptide beta-strand.

Authors:  Tatyana V Khasanova; Omid Khakshoor; James S Nowick
Journal:  Org Lett       Date:  2008-10-21       Impact factor: 6.005

6.  Principles of self-assembly of helical pores from dendritic dipeptides.

Authors:  Virgil Percec; Andrés E Dulcey; Mihai Peterca; Monica Ilies; Sami Nummelin; Monika J Sienkowska; Paul A Heiney
Journal:  Proc Natl Acad Sci U S A       Date:  2006-02-09       Impact factor: 11.205

7.  Air-water interfacial behavior of amphiphilic peptide analogs of synthetic chloride ion transporters.

Authors:  Elizabeth K Elliott; Keith J Stine; George W Gokel
Journal:  J Memb Sci       Date:  2008-08-01       Impact factor: 8.742

8.  Dendritic domains with hexagonal symmetry formed by x-shaped bolapolyphiles in lipid membranes.

Authors:  Stefan Werner; Helgard Ebert; Bob-Dan Lechner; Frank Lange; Anja Achilles; Ruth Bärenwald; Silvio Poppe; Alfred Blume; Kay Saalwächter; Carsten Tschierske; Kirsten Bacia
Journal:  Chemistry       Date:  2015-05-04       Impact factor: 5.236

9.  Articulated rods - a novel class of molecular rods based on oligospiroketals (OSK).

Authors:  Pablo Wessig; Roswitha Merkel; Peter Müller
Journal:  Beilstein J Org Chem       Date:  2015-01-16       Impact factor: 2.883

10.  Stimuli-responsive polyguanidino-oxanorbornene membrane transporters as multicomponent sensors in complex matrices.

Authors:  Andreas Hennig; Gregory J Gabriel; Gregory N Tew; Stefan Matile
Journal:  J Am Chem Soc       Date:  2008-07-15       Impact factor: 15.419

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