Literature DB >> 15705524

Rapid high-resolution four-dimensional NMR spectroscopy using the filter diagonalization method and its advantages for detailed structural elucidation of oligosaccharides.

Geoffrey S Armstrong1, Vladimir A Mandelshtam, A J Shaka, Brad Bendiak.   

Abstract

Four-dimensional nuclear magnetic resonance spectroscopy with high resolution of signals in the indirect dimensions is reported as an implementation of the filter diagonalization method (FDM). Using an oligosaccharide derivatized with 13C-labeled acetyl isotags, a four-dimensional constant-time pulse sequence was tailored for conjoint use with the FDM. Results demonstrate that high resolution in all dimensions can be achieved using a relatively short experimental time period (19 h), even though the spectrum is highly congested in the direct and all three indirect dimensions. The combined use of isotags, constant-time pulse sequences, and FDM permits rapid isolation of sugar ring proton spin systems in multiple dimensions and enables all endocyclic J-couplings to be simply measured, the key goal to assigning sugar stereochemistry and anomeric configuration. A general method for rapid, unambiguous elucidation of spin systems in oligosaccharides has been a long-sought goal of carbohydrate NMR, and isotags combined with the FDM now enable this to be easily performed. Additional general advantages of the FDM program for generating high-resolution 2D slices in any dimension from a 4D spectrum are emphasized.

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Year:  2005        PMID: 15705524     DOI: 10.1016/j.jmr.2004.11.027

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  12 in total

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2.  Random sampling of evolution time space and Fourier transform processing.

Authors:  Krzysztof Kazimierczuk; Anna Zawadzka; Wiktor Koźmiński; Igor Zhukov
Journal:  J Biomol NMR       Date:  2006-09-21       Impact factor: 2.835

3.  Automatic assignment of protein backbone resonances by direct spectrum inspection in targeted acquisition of NMR data.

Authors:  Leo E Wong; James E Masse; Victor Jaravine; Vladislav Orekhov; Konstantin Pervushin
Journal:  J Biomol NMR       Date:  2008-09-11       Impact factor: 2.835

Review 4.  Biomolecular NMR data analysis.

Authors:  Michael R Gryk; Jay Vyas; Mark W Maciejewski
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2010-05       Impact factor: 9.795

5.  Evaluation of ion mobility-mass spectrometry for determining the isomeric heterogeneity of oligosaccharide-alditols derived from bovine submaxillary mucin.

Authors:  Hongli Li; Brad Bendiak; Kimberly Kaplan; Eric Davis; William F Siems; Herbert H Hill
Journal:  Int J Mass Spectrom       Date:  2013-10-15       Impact factor: 1.986

6.  Differentiation of the stereochemistry and anomeric configuration for 1-3 linked disaccharides via tandem mass spectrometry and 18O-labeling.

Authors:  Chiharu Konda; Brad Bendiak; Yu Xia
Journal:  J Am Soc Mass Spectrom       Date:  2011-11-18       Impact factor: 3.109

7.  Coupled decomposition of four-dimensional NOESY spectra.

Authors:  Sebastian Hiller; Ilghis Ibraghimov; Gerhard Wagner; Vladislav Y Orekhov
Journal:  J Am Chem Soc       Date:  2009-09-16       Impact factor: 15.419

8.  Enhanced spectral resolution by high-dimensional NMR using the filter diagonalization method and "hidden" dimensions.

Authors:  Xi Meng; Bao D Nguyen; Clark Ridge; A J Shaka
Journal:  J Magn Reson       Date:  2008-09-30       Impact factor: 2.229

9.  Resolving structural isomers of monosaccharide methyl glycosides using drift tube and traveling wave ion mobility mass spectrometry.

Authors:  Hongli Li; Kevin Giles; Brad Bendiak; Kimberly Kaplan; William F Siems; Herbert H Hill
Journal:  Anal Chem       Date:  2012-03-13       Impact factor: 6.986

10.  High-resolution pyrimidine- and ribose-specific 4D HCCH-COSY spectra of RNA using the filter diagonalization method.

Authors:  Justin T Douglas; Michael P Latham; Geoffrey S Armstrong; Brad Bendiak; Arthur Pardi
Journal:  J Biomol NMR       Date:  2008-07-15       Impact factor: 2.835

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