Literature DB >> 15699035

Activation of the LicT transcriptional antiterminator involves a domain swing/lock mechanism provoking massive structural changes.

Marc Graille1, Cong-Zhao Zhou, Véronique Receveur-Bréchot, Bruno Collinet, Nathalie Declerck, Herman van Tilbeurgh.   

Abstract

The transcriptional antiterminator protein LicT regulates the expression of Bacillus subtilis operons involved in beta-glucoside metabolism. It consists of an N-terminal RNA-binding domain (co-antiterminator (CAT)) and two phosphorylatable phosphotransferase system regulation domains (PRD1 and PRD2). In the activated state, each PRD forms a dimeric unit with the phosphorylation sites totally buried at the dimer interface. Here we present the 1.95 A resolution structure of the inactive LicT PRDs as well as the molecular solution structure of the full-length protein deduced from small angle x-ray scattering. Comparison of native (inactive) and mutant (constitutively active) PRD crystal structures shows massive tertiary and quaternary rearrangements of the entire regulatory domain. In the inactive state, a wide swing movement of PRD2 results in dimer opening and brings the phosphorylation sites to the protein surface. This movement is accompanied by additional structural rearrangements of both the PRD1-PRD1 ' interface and the CAT-PRD1 linker. Small angle x-ray scattering experiments indicate that the amplitude of the PRD2 swing might even be wider in solution than in the crystals. Our results suggest that PRD2 is highly mobile in the native protein, whereas it is locked upon activation by phosphorylation.

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Year:  2005        PMID: 15699035     DOI: 10.1074/jbc.M414642200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  24 in total

1.  Determinants of interaction specificity of the Bacillus subtilis GlcT antitermination protein: functionality and phosphorylation specificity depend on the arrangement of the regulatory domains.

Authors:  Sebastian Himmel; Christopher P Zschiedrich; Stefan Becker; He-Hsuan Hsiao; Sebastian Wolff; Christine Diethmaier; Henning Urlaub; Donghan Lee; Christian Griesinger; Jörg Stülke
Journal:  J Biol Chem       Date:  2012-06-21       Impact factor: 5.157

2.  Structure of the RBD-PRDI fragment of the antiterminator protein GlcT.

Authors:  Sebastian Himmel; Christian Grosse; Sebastian Wolff; Claudia Schwiegk; Stefan Becker
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-06-22

Review 3.  The Landscape of Intertwined Associations in Homooligomeric Proteins.

Authors:  Shoshana J Wodak; Anatoly Malevanets; Stephen S MacKinnon
Journal:  Biophys J       Date:  2015-09-01       Impact factor: 4.033

4.  Optimal clustering for detecting near-native conformations in protein docking.

Authors:  Dima Kozakov; Karl H Clodfelter; Sandor Vajda; Carlos J Camacho
Journal:  Biophys J       Date:  2005-05-20       Impact factor: 4.033

Review 5.  How phosphotransferase system-related protein phosphorylation regulates carbohydrate metabolism in bacteria.

Authors:  Josef Deutscher; Christof Francke; Pieter W Postma
Journal:  Microbiol Mol Biol Rev       Date:  2006-12       Impact factor: 11.056

6.  Localization of ligand binding site in proteins identified in silico.

Authors:  Michal Brylinski; Marek Kochanczyk; Elzbieta Broniatowska; Irena Roterman
Journal:  J Mol Model       Date:  2007-03-30       Impact factor: 1.810

7.  Structural mechanism of signal transduction between the RNA-binding domain and the phosphotransferase system regulation domain of the LicT antiterminator.

Authors:  Hélène Déméné; Thierry Ducat; Karine De Guillen; Catherine Birck; Stéphane Aymerich; Michel Kochoyan; Nathalie Declerck
Journal:  J Biol Chem       Date:  2008-08-05       Impact factor: 5.157

8.  Crystal structure of Bacillus anthracis virulence regulator AtxA and effects of phosphorylated histidines on multimerization and activity.

Authors:  Troy G Hammerstrom; Lori B Horton; Michelle C Swick; Andrzej Joachimiak; Jerzy Osipiuk; Theresa M Koehler
Journal:  Mol Microbiol       Date:  2014-12-30       Impact factor: 3.501

9.  Dynamic localization of a transcription factor in Bacillus subtilis: the LicT antiterminator relocalizes in response to inducer availability.

Authors:  Fabian M Rothe; Christoph Wrede; Martin Lehnik-Habrink; Boris Görke; Jörg Stülke
Journal:  J Bacteriol       Date:  2013-03-08       Impact factor: 3.490

Review 10.  Nucleoside diphosphate kinase as protein histidine kinase.

Authors:  Paul V Attwood; Thomas Wieland
Journal:  Naunyn Schmiedebergs Arch Pharmacol       Date:  2014-06-25       Impact factor: 3.000

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