Literature DB >> 15697948

Nonlinear structures and thermodynamic instabilities in a one-dimensional lattice system.

Nikos Theodorakopoulos1, Michel Peyrard, Robert S Mackay.   

Abstract

The equilibrium states of the discrete Peyrard-Bishop Hamiltonian with one end fixed are computed exactly from the two-dimensional nonlinear Morse map. These exact nonlinear structures are interpreted as domain walls, interpolating between bound and unbound segments of the chain. Their free energy is calculated to leading order beyond the Gaussian approximation. Thermodynamic instabilities (e.g., DNA unzipping and/or thermal denaturation) can be understood in terms of domain wall formation.

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Year:  2004        PMID: 15697948     DOI: 10.1103/PhysRevLett.93.258101

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  2 in total

1.  Stationary solutions for a modified Peyrard-Bishop DNA model with up to third-neighbor interactions.

Authors:  Z Rapti
Journal:  Eur Phys J E Soft Matter       Date:  2010-06-17       Impact factor: 1.890

2.  Can we model DNA at the mesoscale?

Authors:  S Cuesta-López; J Errami; F Falo; M Peyrard
Journal:  J Biol Phys       Date:  2005-12       Impact factor: 1.365

  2 in total

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