Literature DB >> 15696376

Genetic variants in the calpain-10 gene and the development of type 2 diabetes in the Japanese population.

Naoko Iwasaki1, Yukio Horikawa2, Takafumi Tsuchiya3, Yutaka Kitamura4, Takahiro Nakamura4, Yukio Tanizawa5, Yoshitomo Oka6, Kazuo Hara7, Takashi Kadowaki7, Takuya Awata8, Masashi Honda9, Katsuko Yamashita10, Naohisa Oda11, Li Yu2, Norihiro Yamada2, Makiko Ogata12, Naoyuki Kamatani4, Yasuhiko Iwamoto12, Laura Del Bosque-Plata3, M Geoffrey Hayes3, Nancy J Cox3, Graeme I Bell3.   

Abstract

Variation in the gene encoding the cysteine protease calpain-10 has been linked and associated with risk of type 2 diabetes. We have examined the effect of three polymorphisms in the calpain-10 gene (SNP-43, Indel-19, and SNP-63) on the development of type 2 diabetes in the Japanese population in a pooled analysis of 927 patients and 929 controls. We observed that SNP-43, Indel-19, and SNP-63 either individually or as a haplotype were not associated with altered risk of type 2 diabetes with the exception of the rare 111/221 haplogenotype (odds ratio (OR) =3.53, P=0.02). However, stratification based on the median age-at-diagnosis in the pooled study population (<50 and > or =50 years) revealed that allele 2 of Indel-19 and the 121 haplotype were associated with reduced risk in patients with later age-at-diagnosis (age-at-diagnosis > or =50 years OR=0.82 and 0.80, respectively; P=0.04 and 0.02). Thus, variation in the calpain-10 gene may affect risk of type 2 diabetes in Japanese, especially in older individuals.

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Year:  2005        PMID: 15696376     DOI: 10.1007/s10038-004-0225-5

Source DB:  PubMed          Journal:  J Hum Genet        ISSN: 1434-5161            Impact factor:   3.172


  15 in total

1.  GOLD--graphical overview of linkage disequilibrium.

Authors:  G R Abecasis; W O Cookson
Journal:  Bioinformatics       Date:  2000-02       Impact factor: 6.937

2.  Meta-analysis and a large association study confirm a role for calpain-10 variation in type 2 diabetes susceptibility.

Authors:  Michael N Weedon; Peter E H Schwarz; Yukio Horikawa; Naoko Iwasaki; Thomas Illig; Rolf Holle; Wolfgang Rathmann; Thomas Selisko; Jan Schulze; Katherine R Owen; Julie Evans; Laura Del Bosque-Plata; Graham Hitman; Mark Walker; Jonathan C Levy; Mike Sampson; Graeme I Bell; Mark I McCarthy; Andrew T Hattersley; Timothy M Frayling
Journal:  Am J Hum Genet       Date:  2003-11       Impact factor: 11.025

3.  Mapping genes influencing type 2 diabetes risk and BMI in Japanese subjects.

Authors:  Naoko Iwasaki; Nancy J Cox; Yan-Qing Wang; Peter E H Schwarz; Graeme I Bell; Masashi Honda; Mitsuo Imura; Makiko Ogata; Masayuki Saito; Naoyuki Kamatani; Yasuhiko Iwamoto
Journal:  Diabetes       Date:  2003-01       Impact factor: 9.461

4.  Homozygous combination of calpain 10 gene haplotypes is associated with type 2 diabetes mellitus in a Polish population.

Authors:  Maciej T Malecki; Dariusz K Moczulski; Tomasz Klupa; Krzysztof Wanic; Katarzyna Cyganek; Jakub Frey; Jacek Sieradzki
Journal:  Eur J Endocrinol       Date:  2002-05       Impact factor: 6.664

5.  Calpain 10 gene polymorphisms are related, not to type 2 diabetes, but to increased serum cholesterol in Japanese.

Authors:  Makoto Daimon; Toshihide Oizumi; Tamotsu Saitoh; Wataru Kameda; Hiroshi Yamaguchi; Hiroshi Ohnuma; Masahiko Igarashi; Hideo Manaka; Takeo Kato
Journal:  Diabetes Res Clin Pract       Date:  2002-05       Impact factor: 5.602

6.  The Pro12 -->Ala substitution in PPAR-gamma is associated with resistance to development of diabetes in the general population: possible involvement in impairment of insulin secretion in individuals with type 2 diabetes.

Authors:  H Mori; H Ikegami; Y Kawaguchi; S Seino; N Yokoi; J Takeda; I Inoue; Y Seino; K Yasuda; T Hanafusa; K Yamagata; T Awata; T Kadowaki; K Hara; N Yamada; T Gotoda; N Iwasaki; Y Iwamoto; T Sanke; K Nanjo; Y Oka; A Matsutani; E Maeda; M Kasuga
Journal:  Diabetes       Date:  2001-04       Impact factor: 9.461

7.  Variants in the calpain-10 gene predispose to insulin resistance and elevated free fatty acid levels.

Authors:  Marju Orho-Melander; Mia Klannemark; Malin K Svensson; Martin Ridderstråle; Cecilia M Lindgren; Leif Groop
Journal:  Diabetes       Date:  2002-08       Impact factor: 9.461

8.  Are variants in the CAPN10 gene related to risk of type 2 diabetes? A quantitative assessment of population and family-based association studies.

Authors:  Yiqing Song; Tianhua Niu; JoAnn E Manson; David J Kwiatkowski; Simin Liu
Journal:  Am J Hum Genet       Date:  2004-01-13       Impact factor: 11.025

9.  Genetic variations in calpain-10 gene are not a major factor in the occurrence of type 2 diabetes in Japanese.

Authors:  Yukio Horikawa; Naohisa Oda; Li Yu; Shigeo Imamura; Kentaro Fujiwara; Masaki Makino; Yutaka Seino; Mitsuyasu Itoh; Jun Takeda
Journal:  J Clin Endocrinol Metab       Date:  2003-01       Impact factor: 5.958

10.  RyR2 and calpain-10 delineate a novel apoptosis pathway in pancreatic islets.

Authors:  James D Johnson; Zhiqiang Han; Kenichi Otani; Honggang Ye; Yan Zhang; Hong Wu; Yukio Horikawa; Stanley Misler; Graeme I Bell; Kenneth S Polonsky
Journal:  J Biol Chem       Date:  2004-03-25       Impact factor: 5.157

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  4 in total

1.  A novel 111/121 diplotype in the Calpain-10 gene is associated with type 2 diabetes.

Authors:  Eun Seok Kang; Hye Joo Kim; Moonsuk Nam; Chung Mo Nam; Chul Woo Ahn; Bong Soo Cha; Hyun Chul Lee
Journal:  J Hum Genet       Date:  2006-05-24       Impact factor: 3.172

2.  Estimation of haplotype associated with several quantitative phenotypes based on maximization of area under a receiver operating characteristic (ROC) curve.

Authors:  Shigeo Kamitsuji; Naoyuki Kamatani
Journal:  J Hum Genet       Date:  2006-02-15       Impact factor: 3.172

3.  Common polymorphisms of calpain-10 and the risk of Type 2 Diabetes in a Tunisian Arab population: a case-control study.

Authors:  Intissar Ezzidi; Amira Turki; Safia Messaoudi; Molka Chaieb; Maha Kacem; Ghada M Al-Khateeb; Touhami Mahjoub; Wassim Y Almawi; Nabil Mtiraoui
Journal:  BMC Med Genet       Date:  2010-05-15       Impact factor: 2.103

4.  The Uyghur population and genetic susceptibility to type 2 diabetes: potential role for variants in CAPN10, APM1 and FUT6 genes.

Authors:  Feifei Zhao; Dolikun Mamatyusupu; Youxin Wang; Honghong Fang; Hao Wang; Qing Gao; Hao Dong; Siqi Ge; Xinwei Yu; Jie Zhang; Lijuan Wu; Manshu Song; Wei Wang
Journal:  J Cell Mol Med       Date:  2016-07-04       Impact factor: 5.310

  4 in total

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