Literature DB >> 1569565

Kinetic properties of Escherichia coli ribosomes with altered forms of S12.

N Bilgin1, F Claesens, H Pahverk, M Ehrenberg.   

Abstract

E. coli ribosomes with alterations in S12 leading to streptomycin resistance (SmR), dependence (SmD) and pseudodependence (SmP) were studied with the quench-flow technique. Kinetic changes at the various steps of the elongation cycle were identified. The rate of hydrolysis of GTP in the ternary complex in the ribosomal A-site is decreased drastically in SmD and moderately in SmP in relation to wild-type ribosomes. Addition of streptomycin restores much of the wild-type behaviour. The SmD, SmP and SmR ribosomes have an enhanced GTP-hydrolysis idling reaction on EF-Tu, which is correlated with how aggressive proofreaders these ribosomes are in steady-state assays. We use our in vitro findings to discuss the in vivo physiology of these mutants as well as mechanistic features of E. coli translation.

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Year:  1992        PMID: 1569565     DOI: 10.1016/0022-2836(92)90466-w

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  45 in total

1.  The accuracy of codon recognition by polypeptide release factors.

Authors:  D V Freistroffer; M Kwiatkowski; R H Buckingham; M Ehrenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-29       Impact factor: 11.205

2.  The novel mutation K87E in ribosomal protein S12 enhances protein synthesis activity during the late growth phase in Escherichia coli.

Authors:  T Hosaka; N Tamehiro; N Chumpolkulwong; C Hori-Takemoto; M Shirouzu; S Yokoyama; K Ochi
Journal:  Mol Genet Genomics       Date:  2004-02-14       Impact factor: 3.291

3.  pH-sensitivity of the ribosomal peptidyl transfer reaction dependent on the identity of the A-site aminoacyl-tRNA.

Authors:  Magnus Johansson; Ka-Weng Ieong; Stefan Trobro; Peter Strazewski; Johan Åqvist; Michael Y Pavlov; Måns Ehrenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-17       Impact factor: 11.205

4.  A model for protein translation: polysome self-organization leads to maximum protein synthesis rates.

Authors:  Hermioni Zouridis; Vassily Hatzimanikatis
Journal:  Biophys J       Date:  2006-11-10       Impact factor: 4.033

5.  Mutational analysis of S12 protein and implications for the accuracy of decoding by the ribosome.

Authors:  Divya Sharma; Anthony R Cukras; Elizabeth J Rogers; Daniel R Southworth; Rachel Green
Journal:  J Mol Biol       Date:  2007-10-06       Impact factor: 5.469

6.  Effects of codon distributions and tRNA competition on protein translation.

Authors:  Hermioni Zouridis; Vassily Hatzimanikatis
Journal:  Biophys J       Date:  2008-03-21       Impact factor: 4.033

7.  A signal relay between ribosomal protein S12 and elongation factor EF-Tu during decoding of mRNA.

Authors:  Steven T Gregory; Jennifer F Carr; Albert E Dahlberg
Journal:  RNA       Date:  2008-12-17       Impact factor: 4.942

Review 8.  Fidelity at the molecular level: lessons from protein synthesis.

Authors:  Hani S Zaher; Rachel Green
Journal:  Cell       Date:  2009-02-20       Impact factor: 41.582

9.  Ribosomal protein S12 and aminoglycoside antibiotics modulate A-site mRNA cleavage and transfer-messenger RNA activity in Escherichia coli.

Authors:  Laura E Holberger; Christopher S Hayes
Journal:  J Biol Chem       Date:  2009-09-23       Impact factor: 5.157

10.  Spontaneous mutations in the human immunodeficiency virus type 1 gag gene that affect viral replication in the presence of cyclosporins.

Authors:  C Aberham; S Weber; W Phares
Journal:  J Virol       Date:  1996-06       Impact factor: 5.103

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