Literature DB >> 15695202

Morphogenesis of the branching reef coral Madracis mirabilis.

Jaap A Kaandorp1, Peter M A Sloot, Roeland M H Merks, Rolf P M Bak, Mark J A Vermeij, Cornelia Maier.   

Abstract

Understanding external deciding factors in growth and morphology of reef corals is essential to elucidate the role of corals in marine ecosystems, and to explain their susceptibility to pollution and global climate change. Here, we extend on a previously presented model for simulating the growth and form of a branching coral and we compare the simulated morphologies to three-dimensional (3D) images of the coral species Madracis mirabilis. Simulation experiments and isotope analyses of M. mirabilis skeletons indicate that external gradients of dissolved inorganic carbon (DIC) determine the morphogenesis of branching, phototrophic corals. In the simulations we use a first principle model of accretive growth based on local interactions between the polyps. The only species-specific information in the model is the average size of a polyp. From flow tank and simulation studies it is known that a relatively large stagnant and diffusion dominated region develops within a branching colony. We have used this information by assuming in our model that growth is entirely driven by a diffusion-limited process, where DIC supply represents the limiting factor. With such model constraints it is possible to generate morphologies that are virtually indistinguishable from the 3D images of the actual colonies.

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Year:  2005        PMID: 15695202      PMCID: PMC1634949          DOI: 10.1098/rspb.2004.2934

Source DB:  PubMed          Journal:  Proc Biol Sci        ISSN: 0962-8452            Impact factor:   5.349


  9 in total

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Authors: 
Journal:  Phys Rev Lett       Date:  1996-09-09       Impact factor: 9.161

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Authors:  M J van Oppen; B J McDonald; B Willis; D J Miller
Journal:  Mol Biol Evol       Date:  2001-07       Impact factor: 16.240

3.  Morphological models of radiate accretive growth and the influence of hydrodynamics.

Authors:  J A Kaandorp; P M Sloot
Journal:  J Theor Biol       Date:  2001-04-07       Impact factor: 2.691

4.  Simulation and analysis of flow patterns around the scleractinian coral Madracis mirabilis (Duchassaing and Michelotti).

Authors:  Jaap A Kaandorp; Evert A Koopman; Peter M A Sloot; Rolf P M Bak; Mark J A Vermeij; Leo E H Lampmann
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2003-09-29       Impact factor: 6.237

5.  Influence of stagnant zones on transient and asymptotic dispersion in macroscopically homogeneous porous media.

Authors:  D Kandhai; D Hlushkou; A G Hoekstra; P M A Sloot; H Van As; U Tallarek
Journal:  Phys Rev Lett       Date:  2002-05-24       Impact factor: 9.161

6.  Models of coral growth: spontaneous branching, compactification and the Laplacian growth assumption.

Authors:  Roeland Merks; Alfons Hoekstra; Jaap Kaandorp; Peter Sloot
Journal:  J Theor Biol       Date:  2003-09-21       Impact factor: 2.691

7.  Flexibility in algal endosymbioses shapes growth in reef corals.

Authors:  Angela F Little; Madeleine J H van Oppen; Bette L Willis
Journal:  Science       Date:  2004-06-04       Impact factor: 47.728

8.  Polyp oriented modelling of coral growth.

Authors:  Roeland M H Merks; Alfons G Hoekstra; Jaap A Kaandorp; Peter M A Sloot
Journal:  J Theor Biol       Date:  2004-06-21       Impact factor: 2.691

9.  Suppression of skeletal growth in scleractinian corals by decreasing ambient carbonate-ion concentration: a cross-family comparison.

Authors:  Francesca Marubini; Christine Ferrier-Pages; Jean-Pierre Cuif
Journal:  Proc Biol Sci       Date:  2003-01-22       Impact factor: 5.349

  9 in total
  12 in total

1.  A comparison between coral colonies of the genus Madracis and simulated forms.

Authors:  Maxim V Filatov; Jaap A Kaandorp; Marten Postma; Robert van Liere; Kris J Kruszyński; Mark J A Vermeij; Geert J Streekstra; Rolf P M Bak
Journal:  Proc Biol Sci       Date:  2010-06-23       Impact factor: 5.349

2.  Modelling genetic regulation of growth and form in a branching sponge.

Authors:  Jaap A Kaandorp; Joke G Blom; Jozef Verhoef; Max Filatov; M Postma; Werner E G Müller
Journal:  Proc Biol Sci       Date:  2008-11-22       Impact factor: 5.349

3.  A Lagrangian particle method for reaction-diffusion systems on deforming surfaces.

Authors:  Michael Bergdorf; Ivo F Sbalzarini; Petros Koumoutsakos
Journal:  J Math Biol       Date:  2009-12-18       Impact factor: 2.259

4.  The role of turbulent hydrodynamics and surface morphology on heat and mass transfer in corals.

Authors:  Jonathan B Stocking; Christian Laforsch; Robert Sigl; Matthew A Reidenbach
Journal:  J R Soc Interface       Date:  2018-12-21       Impact factor: 4.118

5.  Critical evaluation of branch polarity and apical dominance as dictators of colony astogeny in a branching coral.

Authors:  Lee Shaish; Baruch Rinkevich
Journal:  PLoS One       Date:  2009-01-01       Impact factor: 3.240

6.  Modelling growth and form of the scleractinian coral Pocillopora verrucosa and the influence of hydrodynamics.

Authors:  Nol Chindapol; Jaap A Kaandorp; Carolina Cronemberger; Tali Mass; Amatzia Genin
Journal:  PLoS Comput Biol       Date:  2013-01-10       Impact factor: 4.475

7.  Modulation of light-enhancement to symbiotic algae by light-scattering in corals and evolutionary trends in bleaching.

Authors:  Luisa A Marcelino; Mark W Westneat; Valentina Stoyneva; Jillian Henss; Jeremy D Rogers; Andrew Radosevich; Vladimir Turzhitsky; Margaret Siple; Andrew Fang; Timothy D Swain; Jennifer Fung; Vadim Backman
Journal:  PLoS One       Date:  2013-04-22       Impact factor: 3.240

8.  How plastic can phenotypic plasticity be? The branching coral Stylophora pistillata as a model system.

Authors:  Lee Shaish; Avigdor Abelson; Baruch Rinkevich
Journal:  PLoS One       Date:  2007-07-25       Impact factor: 3.240

9.  A semi-automatic method to extract canal pathways in 3D micro-CT images of Octocorals.

Authors:  Alfredo Morales Pinzón; Maciej Orkisz; Catalina María Rodríguez Useche; Juan Sebastián Torres González; Stanislas Teillaud; Juan Armando Sánchez; Marcela Hernández Hoyos
Journal:  PLoS One       Date:  2014-01-23       Impact factor: 3.240

10.  Coral-algae metabolism and diurnal changes in the CO2-carbonate system of bulk sea water.

Authors:  Paul L Jokiel; Christopher P Jury; Ku'ulei S Rodgers
Journal:  PeerJ       Date:  2014-05-22       Impact factor: 2.984

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