Literature DB >> 15692735

Quantitation of protein expression in a cell-free system: Efficient detection of yields and 19F NMR to identify folded protein.

Muniasamy Neerathilingam1, Lesley H Greene, Simon A Colebrooke, Iain D Campbell, David Staunton.   

Abstract

We have developed an efficient and novel filter assay method, involving radioactive labelling and imaging, to quantify the expression of soluble proteins from a cell-free translation system. Here this method is combined with the conformational sensitivity of 19F NMR to monitor the folded state of the expressed protein. This report describes the optimisation of 6-fluorotryptophan incorporation in a His-tagged human serum retinol-binding protein (RBP), a disulphide bonded beta-barrel protein. Appropriate reagent concentrations for producing fluorine labelled RBP in a cell-free translation system are described. It is shown that 19F NMR is a suitable method for monitoring the production of correctly folded protein from a high-throughput expression system.

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Year:  2005        PMID: 15692735     DOI: 10.1007/s10858-004-5357-6

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  24 in total

1.  An NMR approach to structural proteomics.

Authors:  Adelinda Yee; Xiaoqing Chang; Antonio Pineda-Lucena; Bin Wu; Anthony Semesi; Brian Le; Theresa Ramelot; Gregory M Lee; Sudeepa Bhattacharyya; Pablo Gutierrez; Aleksej Denisov; Chang-Hun Lee; John R Cort; Guennadi Kozlov; Jack Liao; Grzegorz Finak; Limin Chen; David Wishart; Weontae Lee; Lawrence P McIntosh; Kalle Gehring; Michael A Kennedy; Aled M Edwards; Cheryl H Arrowsmith
Journal:  Proc Natl Acad Sci U S A       Date:  2002-02-19       Impact factor: 11.205

2.  Structural proteomics of an archaeon.

Authors:  D Christendat; A Yee; A Dharamsi; Y Kluger; A Savchenko; J R Cort; V Booth; C D Mackereth; V Saridakis; I Ekiel; G Kozlov; K L Maxwell; N Wu; L P McIntosh; K Gehring; M A Kennedy; A R Davidson; E F Pai; M Gerstein; A M Edwards; C H Arrowsmith
Journal:  Nat Struct Biol       Date:  2000-10

3.  Expression of soluble recombinant proteins in a cell-free system using a 96-well format.

Authors:  Didier Busso; Rosalind Kim; Sung-Hou Kim
Journal:  J Biochem Biophys Methods       Date:  2003-03-28

Review 4.  Protein expression systems for structural genomics and proteomics.

Authors:  Shigeyuki Yokoyama
Journal:  Curr Opin Chem Biol       Date:  2003-02       Impact factor: 8.822

Review 5.  NMR and structural genomics.

Authors:  David Staunton; Jo Owen; Iain D Campbell
Journal:  Acc Chem Res       Date:  2003-03       Impact factor: 22.384

6.  Role of conserved residues in structure and stability: tryptophans of human serum retinol-binding protein, a model for the lipocalin superfamily.

Authors:  L H Greene; E D Chrysina; L I Irons; A C Papageorgiou; K R Acharya; K Brew
Journal:  Protein Sci       Date:  2001-11       Impact factor: 6.725

7.  NMR analysis of in vitro-synthesized proteins without purification: a high-throughput approach.

Authors:  Laurent Guignard; Kiyoshi Ozawa; Sharon E Pursglove; Gottfried Otting; Nicholas E Dixon
Journal:  FEBS Lett       Date:  2002-07-31       Impact factor: 4.124

8.  19F NMR studies of plasminogen activator inhibitor-1.

Authors:  Glenn L Abbott; Grant E Blouse; Michel J Perron; Joseph D Shore; Linda A Luck; Arthur G Szabo
Journal:  Biochemistry       Date:  2004-02-17       Impact factor: 3.162

9.  Fluorine-NMR experiments for high-throughput screening: theoretical aspects, practical considerations, and range of applicability.

Authors:  Claudio Dalvit; Paul E Fagerness; Daneen T A Hadden; Ronald W Sarver; Brian J Stockman
Journal:  J Am Chem Soc       Date:  2003-06-25       Impact factor: 15.419

10.  Fluorotyrosine alkaline phosphatase from Escherichia coli: preparation, properties, and fluorine-19 nuclear magnetic resonance spectrum.

Authors:  B D Sykes; H I Weingarten; M J Schlesinger
Journal:  Proc Natl Acad Sci U S A       Date:  1974-02       Impact factor: 11.205

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  6 in total

1.  Cell-free protein synthesis in an autoinduction system for NMR studies of protein-protein interactions.

Authors:  Kiyoshi Ozawa; Slobodan Jergic; Jeffrey A Crowther; Phillip R Thompson; Gene Wijffels; Gottfried Otting; Nicholas A Dixon
Journal:  J Biomol NMR       Date:  2005-07       Impact factor: 2.835

2.  Structural studies of Bcl-xL/ligand complexes using 19F NMR.

Authors:  Liping Yu; Philip J Hajduk; Jamey Mack; Edward T Olejniczak
Journal:  J Biomol NMR       Date:  2006-04       Impact factor: 2.835

3.  Protein-observed (19)F-NMR for fragment screening, affinity quantification and druggability assessment.

Authors:  Clifford T Gee; Keith E Arntson; Andrew K Urick; Neeraj K Mishra; Laura M L Hawk; Andrea J Wisniewski; William C K Pomerantz
Journal:  Nat Protoc       Date:  2016-07-14       Impact factor: 13.491

4.  Combinatorial selection of DNA thioaptamers targeted to the HA binding domain of human CD44.

Authors:  Anoma Somasunderam; Varatharasa Thiviyanathan; Takemi Tanaka; Xin Li; Muniasamy Neerathilingam; Ganesh Lakshmana Rao Lokesh; Aman Mann; Yang Peng; Mauro Ferrari; Jim Klostergaard; David G Gorenstein
Journal:  Biochemistry       Date:  2010-10-26       Impact factor: 3.162

5.  Auto-induction medium containing glyphosate for high-level incorporation of unusual aromatic amino acids into proteins.

Authors:  Muniasamy Neerathilingam; John L Markley
Journal:  Biotechniques       Date:  2010-09       Impact factor: 1.993

6.  Deciphering Mode of Action of Functionally Important Regions in the Intrinsically Disordered Paxillin (Residues 1-313) Using Its Interaction with FAT (Focal Adhesion Targeting Domain of Focal Adhesion Kinase).

Authors:  Muniasamy Neerathilingam; Sneha G Bairy; Sumukh Mysore
Journal:  PLoS One       Date:  2016-02-29       Impact factor: 3.240

  6 in total

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