Literature DB >> 15665824

Complete genome sequence of the acetic acid bacterium Gluconobacter oxydans.

Christina Prust1, Marc Hoffmeister, Heiko Liesegang, Arnim Wiezer, Wolfgang Florian Fricke, Armin Ehrenreich, Gerhard Gottschalk, Uwe Deppenmeier.   

Abstract

Gluconobacter oxydans is unsurpassed by other organisms in its ability to incompletely oxidize a great variety of carbohydrates, alcohols and related compounds. Furthermore, the organism is used for several biotechnological processes, such as vitamin C production. To further our understanding of its overall metabolism, we sequenced the complete genome of G. oxydans 621H. The chromosome consists of 2,702,173 base pairs and contains 2,432 open reading frames. In addition, five plasmids were identified that comprised 232 open reading frames. The sequence data can be used for metabolic reconstruction of the pathways leading to industrially important products derived from sugars and alcohols. Although the respiratory chain of G. oxydans was found to be rather simple, the organism contains many membrane-bound dehydrogenases that are critical for the incomplete oxidation of biotechnologically important substrates. Moreover, the genome project revealed the unique biochemistry of G. oxydans with respect to the process of incomplete oxidation.

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Year:  2005        PMID: 15665824     DOI: 10.1038/nbt1062

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN: 1087-0156            Impact factor:   54.908


  95 in total

1.  Metabolic engineering of Gluconobacter oxydans for improved growth rate and growth yield on glucose by elimination of gluconate formation.

Authors:  Vera Krajewski; Petra Simic; Nigel J Mouncey; Stephanie Bringer; Hermann Sahm; Michael Bott
Journal:  Appl Environ Microbiol       Date:  2010-05-07       Impact factor: 4.792

2.  Ubiquitous presence of the hammerhead ribozyme motif along the tree of life.

Authors:  Marcos de la Peña; Inmaculada García-Robles
Journal:  RNA       Date:  2010-08-12       Impact factor: 4.942

3.  Highly selective oxidation of benzyl alcohol using engineered Gluconobacter oxydans in biphasic system.

Authors:  Jian Wu; Ming Hua Li; Jin Ping Lin; Dong Zhi Wei
Journal:  Curr Microbiol       Date:  2010-12-08       Impact factor: 2.188

4.  Expression of two old yellow enzyme homologues from Gluconobacter oxydans and identification of their citral hydrogenation abilities.

Authors:  Bo Yin; Xuepeng Yang; Guodong Wei; Yushu Ma; Dongzhi Wei
Journal:  Mol Biotechnol       Date:  2007-12-05       Impact factor: 2.695

5.  Evidence for a key role of cytochrome bo3 oxidase in respiratory energy metabolism of Gluconobacter oxydans.

Authors:  Janine Richhardt; Bettina Luchterhand; Stephanie Bringer; Jochen Büchs; Michael Bott
Journal:  J Bacteriol       Date:  2013-07-12       Impact factor: 3.490

6.  Genetic analysis of D-xylose metabolism pathways in Gluconobacter oxydans 621H.

Authors:  Minhua Zhang; Liujing Wei; Yi Zhou; Liqin Du; Tadayuki Imanaka; Qiang Hua
Journal:  J Ind Microbiol Biotechnol       Date:  2013-02-05       Impact factor: 3.346

7.  Regulation of a Glycerol-Induced Quinoprotein Alcohol Dehydrogenase by σ54 and a LuxR-Type Regulator in Azospirillum brasilense Sp7.

Authors:  Vijay Shankar Singh; Ashutosh Prakash Dubey; Ankush Gupta; Sudhir Singh; Bhupendra Narain Singh; Anil Kumar Tripathi
Journal:  J Bacteriol       Date:  2017-06-13       Impact factor: 3.490

8.  The Auxiliary NADH Dehydrogenase Plays a Crucial Role in Redox Homeostasis of Nicotinamide Cofactors in the Absence of the Periplasmic Oxidation System in Gluconobacter oxydans NBRC3293.

Authors:  Feronika Heppy Sriherfyna; Minenosuke Matsutani; Kensuke Hirano; Hisashi Koike; Naoya Kataoka; Tetsuo Yamashita; Eiko Nakamaru-Ogiso; Kazunobu Matsushita; Toshiharu Yakushi
Journal:  Appl Environ Microbiol       Date:  2021-01-04       Impact factor: 4.792

9.  Draft genome sequence of Gluconobacter oxydans WSH-003, a strain that is extremely tolerant of saccharides and alditols.

Authors:  Lili Gao; Jingwen Zhou; Jie Liu; Guocheng Du; Jian Chen
Journal:  J Bacteriol       Date:  2012-08       Impact factor: 3.490

10.  Genome sequence analysis of the emerging human pathogenic acetic acid bacterium Granulibacter bethesdensis.

Authors:  David E Greenberg; Stephen F Porcella; Adrian M Zelazny; Kimmo Virtaneva; Dan E Sturdevant; John J Kupko; Kent D Barbian; Amenah Babar; David W Dorward; Steven M Holland
Journal:  J Bacteriol       Date:  2007-09-07       Impact factor: 3.490

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