Literature DB >> 15664898

Exploring the temperature-pressure configurational landscape of biomolecules: from lipid membranes to proteins.

R Winter1, W Dzwolak.   

Abstract

Hydrostatic pressure has been used as a physical parameter for studying the stability and energetics of biomolecular systems, such as lipid mesophases and proteins, but also because high pressure is an important feature of certain natural membrane environments and because the high-pressure phase behaviour of biomolecules is of biotechnological interest. By using spectroscopic and scattering techniques, the temperature- and pressure-dependent structure and phase behaviour of lipid systems, differing in chain configuration, headgroup structure and concentration, and proteins have been studied and are discussed. A thermodynamic approach is presented for studying the stability of proteins as a function of both temperature and pressure. The results demonstrate that combined temperature-pressure dependent studies can help delineate the free-energy landscape of proteins and hence help elucidate which features and thermodynamic parameters are essential in determining the stability of the native conformational state of proteins. We also introduce pressure as a kinetic variable. Applying the pressure jump relaxation technique in combination with time-resolved synchrotron X-ray diffraction and spectroscopic techniques, the kinetics of un/refolding of proteins has been studied. Finally, recent advances in using pressure for studying misfolding and aggregation of proteins will be discussed.

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Year:  2005        PMID: 15664898     DOI: 10.1098/rsta.2004.1507

Source DB:  PubMed          Journal:  Philos Trans A Math Phys Eng Sci        ISSN: 1364-503X            Impact factor:   4.226


  19 in total

1.  Resting membrane potentials recorded on-site in intact skeletal muscles from deep sea fish (Sigmops gracile) salvaged from depths up to 1.000 m.

Authors:  Frederic von Wegner; Sumihiro Koyama; Tetsuya Miwa; Oliver Friedrich
Journal:  Mar Biotechnol (NY)       Date:  2008-02-21       Impact factor: 3.619

2.  Reaching the protein folding speed limit with large, sub-microsecond pressure jumps.

Authors:  Charles Dumont; Tryggvi Emilsson; Martin Gruebele
Journal:  Nat Methods       Date:  2009-05-31       Impact factor: 28.547

3.  Temperature and pressure dependence of protein stability: the engineered fluorescein-binding lipocalin FluA shows an elliptic phase diagram.

Authors:  Johannes Wiedersich; Simone Köhler; Arne Skerra; Josef Friedrich
Journal:  Proc Natl Acad Sci U S A       Date:  2008-04-07       Impact factor: 11.205

4.  New insight into the interaction of TRAF2 C-terminal domain with lipid raft microdomains.

Authors:  Arianna Ceccarelli; Almerinda Di Venere; Eleonora Nicolai; Anastasia De Luca; Nicola Rosato; Enrico Gratton; Giampiero Mei; Anna Maria Caccuri
Journal:  Biochim Biophys Acta Mol Cell Biol Lipids       Date:  2017-05-09       Impact factor: 4.698

5.  Effects of solutes on solubilization and refolding of proteins from inclusion bodies with high hydrostatic pressure.

Authors:  Seung-Hyun Lee; John F Carpenter; Byeong S Chang; Theodore W Randolph; Yong-Sung Kim
Journal:  Protein Sci       Date:  2005-12-29       Impact factor: 6.725

6.  Cell death induced by mild physical perturbations could be related to transient plasma membrane modifications.

Authors:  Hélène Simonin; Laurent Beney; Patrick Gervais
Journal:  J Membr Biol       Date:  2007-06-14       Impact factor: 1.843

7.  Pressure and temperature dependence of growth and morphology of Escherichia coli: experiments and stochastic model.

Authors:  Pradeep Kumar; Albert Libchaber
Journal:  Biophys J       Date:  2013-08-06       Impact factor: 4.033

8.  Pressure-induced endocytic degradation of the Saccharomyces cerevisiae low-affinity tryptophan permease Tat1 is mediated by Rsp5 ubiquitin ligase and functionally redundant PPxY motif proteins.

Authors:  Asaha Suzuki; Takahiro Mochizuki; Satoshi Uemura; Toshiki Hiraki; Fumiyoshi Abe
Journal:  Eukaryot Cell       Date:  2013-05-10

9.  The thermodynamics of simple biomembrane mimetic systems.

Authors:  Antonio Raudino; Maria Grazia Sarpietro; Martina Pannuzzo
Journal:  J Pharm Bioallied Sci       Date:  2011-01

Review 10.  Explaining bathymetric diversity patterns in marine benthic invertebrates and demersal fishes: physiological contributions to adaptation of life at depth.

Authors:  Alastair Brown; Sven Thatje
Journal:  Biol Rev Camb Philos Soc       Date:  2013-10-04
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