Literature DB >> 15657134

alpha-lytic protease can exist in two separately stable conformations with different His57 mobilities and catalytic activities.

Kristin Coffman Haddad1, James L Sudmeier, Daniel A Bachovchin, William W Bachovchin.   

Abstract

alpha-Lytic protease is a bacterial serine protease widely studied as a model system of enzyme catalysis. Here we report that lyophilization induces a structural change in the enzyme that is not reversed by redissolution in water. The structural change reduces the mobility of the active-site histidine residue and the catalytic activity of the enzyme. The application of mild pressure to solutions of the altered enzyme reverses the lyophilization-induced structural change and restores the mobility of the histidine residue and the enzyme's catalytic activity. This effect of lyophilization permits a unique opportunity for investigating the relationship between histidine ring dynamics and catalytic activity. The results demonstrate that His57 in resting enzymes is more mobile than previously thought, especially when protonated. The histidine motion and its correlation to enzyme activity lend support to the reaction-driven ring flip hypothesis.

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Year:  2005        PMID: 15657134      PMCID: PMC545854          DOI: 10.1073/pnas.0409279102

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  21 in total

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Journal:  Proteins       Date:  2002-05-15

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Journal:  J Biol Chem       Date:  2002-03-14       Impact factor: 5.157

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Journal:  J Mol Biol       Date:  1994-08-05       Impact factor: 5.469

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  8 in total

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Authors:  Elise Blankenship; Krishna Vukoti; Masaru Miyagi; David T Lodowski
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2014-02-22

2.  Protonation, tautomerization, and rotameric structure of histidine: a comprehensive study by magic-angle-spinning solid-state NMR.

Authors:  Shenhui Li; Mei Hong
Journal:  J Am Chem Soc       Date:  2011-01-05       Impact factor: 15.419

3.  Complexity of protein energy landscapes studied by solution NMR relaxation dispersion experiments.

Authors:  Gennady Khirich; J Patrick Loria
Journal:  J Phys Chem B       Date:  2015-02-20       Impact factor: 2.991

4.  Serine protease acylation proceeds with a subtle re-orientation of the histidine ring at the tetrahedral intermediate.

Authors:  Yanzi Zhou; Yingkai Zhang
Journal:  Chem Commun (Camb)       Date:  2010-11-29       Impact factor: 6.222

5.  CP-HISQC: a better version of HSQC experiment for intrinsically disordered proteins under physiological conditions.

Authors:  Tairan Yuwen; Nikolai R Skrynnikov
Journal:  J Biomol NMR       Date:  2014-02-05       Impact factor: 2.835

6.  Measurement of histidine pKa values and tautomer populations in invisible protein states.

Authors:  Alexandar L Hansen; Lewis E Kay
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-14       Impact factor: 11.205

7.  Studying hydrogen bonding and dynamics of the acetylate groups of the Special Pair of Rhodobacter sphaeroides WT.

Authors:  Daniel Gräsing; Katarzyna M Dziubińska-Kühn; Stefan Zahn; A Alia; Jörg Matysik
Journal:  Sci Rep       Date:  2019-07-19       Impact factor: 4.379

8.  The Unexplored Importance of Fleeting Chiral Intermediates in Enzyme-Catalyzed Reactions.

Authors:  Manfred T Reetz; Marc Garcia-Borràs
Journal:  J Am Chem Soc       Date:  2021-09-07       Impact factor: 15.419

  8 in total

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