Literature DB >> 15656943

Transcription of T7 DNA immobilised on latex beads and Langmuir-Blodgett film.

Debalina Ghosh1, Madhugiri Ramakanth, Anusarka Bhaumik, Nicolas Faure, Francis Rondelez, Dipankar Chatterji.   

Abstract

The recognition of DNA is the first and most important condition for biological applications, including transcription and translation regulators and DNA sensors. For this purpose, we have developed few systems where we were able to immobilize long double-stranded DNA (dsDNA) successfully to the surfaces of different solid substrates. To achieve this, we have chosen polystyrene beads and standard Langmuir-Blodgett monolayer of Zn-arachidate. In the first attempt, variant of T7 DNA containing one strong promoter A1 for Escherichia coli RNA polymerase was immobilised on uniform polystyrene microspheres (0.31 microm diameter) by covalent grafting. In the latter case, Zn(II) is bound to arachidic acid through charge neutralization. Since tetrahedral Zn(II) participates in DNA recognition through coordination, we have been able to layer DNA over the Zn-arachidate monolayer. The successful immobilization of DNAs on these different substrates was visualized under fluorescence microscope. These immobilized DNAs were used as a template to study in vitro transcription reaction and thus we introduce a new strategy for the study of transcription in heterogeneous phase.

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Year:  2005        PMID: 15656943     DOI: 10.1016/j.jbbm.2004.09.002

Source DB:  PubMed          Journal:  J Biochem Biophys Methods        ISSN: 0165-022X


  3 in total

1.  A cell-free protein-producing gel.

Authors:  Nokyoung Park; Soong Ho Um; Hisakage Funabashi; Jianfeng Xu; Dan Luo
Journal:  Nat Mater       Date:  2009-03-29       Impact factor: 43.841

2.  High-yield cell-free protein production from P-gel.

Authors:  Nokyoung Park; Jason S Kahn; Edward J Rice; Mark R Hartman; Hisakage Funabashi; Jianfeng Xu; Soong Ho Um; Dan Luo
Journal:  Nat Protoc       Date:  2009       Impact factor: 13.491

Review 3.  Novel DNA materials and their applications.

Authors:  Dayong Yang; Michael J Campolongo; Thua Nguyen Nhi Tran; Roanna C H Ruiz; Jason S Kahn; Dan Luo
Journal:  Wiley Interdiscip Rev Nanomed Nanobiotechnol       Date:  2010 Nov-Dec
  3 in total

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