Literature DB >> 15653673

Counteracting osmolyte trimethylamine N-oxide destabilizes proteins at pH below its pKa. Measurements of thermodynamic parameters of proteins in the presence and absence of trimethylamine N-oxide.

Rajendrakumar Singh1, Inamul Haque, Faizan Ahmad.   

Abstract

Earlier studies have reported that trimethylamine N-oxide (TMAO), a naturally occurring osmolyte, is a universal stabilizer of proteins because it folds unstructured proteins and counteracts the deleterious effects of urea and salts on the structure and function of proteins. This conclusion has been reached from the studies of the effect of TMAO on proteins in the pH range 6.0-8.0. In this pH range TMAO is almost neutral (zwitterionic form), for it has a pK(a) of 4.66 +/- 0.10. We have asked the question of whether the effect of TMAO on protein stability is pH-dependent. To answer this question we have carried out thermal denaturation studies of lysozyme, ribonuclease-A, and apo-alpha-lactalbumin in the presence of various TMAO concentrations at different pH values above and below the pK(a) of TMAO. The main conclusion of this study is that near room temperature TMAO destabilizes proteins at pH values below its pK(a), whereas it stabilizes proteins at pH values above its pK(a). This conclusion was reached by determining the T(m) (midpoint of denaturation), delta H(m) (denaturational enthalpy change at T(m)), delta C(p) (constant pressure heat capacity change), and delta G(D) degrees (denaturational Gibbs energy change at 25 degrees C) of proteins in the presence of different TMAO concentrations. Other conclusions of this study are that T(m) and delta G(D) degrees depend on TMAO concentration at each pH value and that delta H(m) and the delta C(p) are not significantly changed in presence of TMAO.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 15653673     DOI: 10.1074/jbc.M410716200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  24 in total

1.  Assisting the reactivation of guanidine hydrochloride-denatured aminoacylase by hydroxypropyl cyclodextrins.

Authors:  Sung-Hye Kim; Jun Zhang; Yan Jiang; Hai-Meng Zhou; Yong-Bin Yan
Journal:  Biophys J       Date:  2006-04-21       Impact factor: 4.033

2.  Protein domain definition should allow for conditional disorder.

Authors:  Kavestri Yegambaram; Esther M M Bulloch; Richard L Kingston
Journal:  Protein Sci       Date:  2013-09-20       Impact factor: 6.725

3.  Protonation of trimethylamine N-oxide (TMAO) is required for stabilization of RNA tertiary structure.

Authors:  Elizabeth J Denning; D Thirumalai; Alexander D MacKerell
Journal:  Biophys Chem       Date:  2013-08-17       Impact factor: 2.352

4.  Thermodynamic and Structural Adaptation Differences between the Mesophilic and Psychrophilic Lactate Dehydrogenases.

Authors:  Sergei Khrapunov; Eric Chang; Robert H Callender
Journal:  Biochemistry       Date:  2017-07-05       Impact factor: 3.162

5.  Folding recombinant spider-silk in H2 O: Effect of osmolytes on the solution conformation of a 15-repeat spider-silk mimetic.

Authors:  Glendon D McLachlan; Babak Gandjian; Hind Alhumaidan
Journal:  Protein Sci       Date:  2016-08-19       Impact factor: 6.725

6.  Trimethylamine N-oxide as a media supplement for cartilage tissue engineering.

Authors:  Grace D O'Connell; Jason V Fong; Neil Dunleavy; Avrum Joffe; Gerard A Ateshian; Clark T Hung
Journal:  J Orthop Res       Date:  2012-06-15       Impact factor: 3.494

Review 7.  Theoretical studies on mechanisms of some Mo enzymes.

Authors:  Nuno M F S A Cerqueira; Bholanath Pakhira; Sabyasachi Sarkar
Journal:  J Biol Inorg Chem       Date:  2015-01-21       Impact factor: 3.358

8.  Counteraction of urea by trimethylamine N-oxide is due to direct interaction.

Authors:  Filip Meersman; Daniel Bowron; Alan K Soper; Michel H J Koch
Journal:  Biophys J       Date:  2009-11-04       Impact factor: 4.033

9.  NMR structure of the viral peptide linked to the genome (VPg) of poliovirus.

Authors:  Catherine H Schein; Numan Oezguen; David E Volk; Ravindranath Garimella; Aniko Paul; Werner Braun
Journal:  Peptides       Date:  2006-03-15       Impact factor: 3.750

10.  The osmolyte trimethylamine-N-oxide stabilizes the Fyn SH3 domain without altering the structure of its folding transition state.

Authors:  Sung Lun Lin; Arash Zarrine-Afsar; Alan R Davidson
Journal:  Protein Sci       Date:  2009-03       Impact factor: 6.725

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.