Literature DB >> 15652325

Brain structural mapping using a novel hybrid implicit/explicit framework based on the level-set method.

A Leow1, C L Yu, S J Lee, S C Huang, H Protas, R Nicolson, K M Hayashi, A W Toga, P M Thompson.   

Abstract

This paper presents a novel approach to feature-based brain image warping, by using a hybrid implicit/explicit framework, which unifies many prior approaches in a common framework. In the first step, we develop links between image warping and the level-set method, and we formulate the fundamental mathematics required for this hybrid implicit/explicit approach. In the second step, we incorporate the large-deformation models into these formulations, leading to a complete and elegant treatment of anatomical structure matching. In this latest approach, exact matching of anatomy is achieved by comparing the target to the warped source structure under the forward mapping and the source to the warped target structure under the backward mapping. Because anatomy is represented nonparametrically, a path is constructed linking the source to the target structure without prior knowledge of their point correspondence. The final point correspondence is constructed based on the linking path with the minimal energy. Intensity-similarity measures can be naturally incorporated in the same framework as landmark constraints by combining them in the gradient descent body forces. We illustrate the approach with two applications: (1) tensor-based morphometry of the corpus callosum in autistic children; and (2) matching cortical surfaces to measure the profile of cortical anatomic variation. In summary, the new mathematical techniques introduced here contribute fundamentally to the mapping of brain structure and its variation and provide a framework that unites feature and intensity-based image registration techniques.

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Year:  2005        PMID: 15652325     DOI: 10.1016/j.neuroimage.2004.09.022

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  19 in total

1.  Role of Kinetic Modeling in Biomedical Imaging.

Authors:  Sung-Cheng Huang
Journal:  J Med Sci       Date:  2008

2.  Diffeomorphic Sulcal Shape Analysis for Cortical Surface Registration.

Authors:  Shantanu H Joshi; Ryan P Cabeen; Anand A Joshi; Roger P Woods; Katherine L Narr; Arthur W Toga
Journal:  Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit       Date:  2010-06-01

3.  LANDMARK MATCHING ON THE SPHERE USING DISTANCE FUNCTIONS.

Authors:  Natasha Leporé; Alex Leow; Paul Thompson
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2006-04

Review 4.  Towards multimodal atlases of the human brain.

Authors:  Arthur W Toga; Paul M Thompson; Susumu Mori; Katrin Amunts; Karl Zilles
Journal:  Nat Rev Neurosci       Date:  2006-12       Impact factor: 34.870

5.  Direct cortical mapping via solving partial differential equations on implicit surfaces.

Authors:  Yonggang Shi; Paul M Thompson; Ivo Dinov; Stanley Osher; Arthur W Toga
Journal:  Med Image Anal       Date:  2007-02-16       Impact factor: 8.545

6.  Brain surface conformal parameterization using Riemann surface structure.

Authors:  Yalin Wang; Lok Ming Lui; Xianfeng Gu; Kiralee M Hayashi; Tony F Chan; Arthur W Toga; Paul M Thompson; Shing-Tung Yau
Journal:  IEEE Trans Med Imaging       Date:  2007-06       Impact factor: 10.048

7.  Inferring brain variability from diffeomorphic deformations of currents: an integrative approach.

Authors:  Stanley Durrleman; Xavier Pennec; Alain Trouvé; Paul Thompson; Nicholas Ayache
Journal:  Med Image Anal       Date:  2008-06-21       Impact factor: 8.545

8.  MRI-derived measurements of human subcortical, ventricular and intracranial brain volumes: Reliability effects of scan sessions, acquisition sequences, data analyses, scanner upgrade, scanner vendors and field strengths.

Authors:  Jorge Jovicich; Silvester Czanner; Xiao Han; David Salat; Andre van der Kouwe; Brian Quinn; Jenni Pacheco; Marilyn Albert; Ronald Killiany; Deborah Blacker; Paul Maguire; Diana Rosas; Nikos Makris; Randy Gollub; Anders Dale; Bradford C Dickerson; Bruce Fischl
Journal:  Neuroimage       Date:  2009-02-20       Impact factor: 6.556

9.  Surface fluid registration of conformal representation: application to detect disease burden and genetic influence on hippocampus.

Authors:  Jie Shi; Paul M Thompson; Boris Gutman; Yalin Wang
Journal:  Neuroimage       Date:  2013-04-13       Impact factor: 6.556

10.  Sulcal set optimization for cortical surface registration.

Authors:  Anand A Joshi; Dimitrios Pantazis; Quanzheng Li; Hanna Damasio; David W Shattuck; Arthur W Toga; Richard M Leahy
Journal:  Neuroimage       Date:  2010-01-04       Impact factor: 6.556

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