Literature DB >> 15650734

Systematic design of chemical oscillators using complexation and precipitation equilibria.

Krisztina Kurin-Csörgei1, Irving R Epstein, Miklós Orbán.   

Abstract

Concentration oscillations are ubiquitous in living systems, where they involve a wide range of chemical species. In contrast, early in vitro chemical oscillators were all derived from two accidentally discovered reactions based on oxyhalogen chemistry. Over the past 25 years, the use of a systematic design algorithm, in which a slow feedback reaction periodically drives a bistable system in a flow reactor between its two steady states, has increased the list of oscillating chemical reactions to dozens of systems. But these oscillating reactions are still confined to a handful of elements that possess multiple stable oxidation states: halogens, sulphur and some transition metals. Here we show that linking a 'core' oscillator to a complexation or precipitation equilibrium can induce concentration oscillations in a species participating in the equilibrium. We use this method to design systems that produce periodic pulses of calcium, aluminium or fluoride ions. The ability to generate oscillations in elements possessing only a single stable oxidation state (for example, Na+, F-, Ca2+) may lead to reactions that are useful for coupling to or probing living systems, or that help us to understand new mechanisms by which periodic behaviour may arise.

Entities:  

Year:  2005        PMID: 15650734     DOI: 10.1038/nature03214

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  8 in total

1.  Modular chemical mechanism predicts spatiotemporal dynamics of initiation in the complex network of hemostasis.

Authors:  Christian J Kastrup; Matthew K Runyon; Feng Shen; Rustem F Ismagilov
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-16       Impact factor: 11.205

2.  Using chemistry and microfluidics to understand the spatial dynamics of complex biological networks.

Authors:  Christian J Kastrup; Matthew K Runyon; Elena M Lucchetta; Jessica M Price; Rustem F Ismagilov
Journal:  Acc Chem Res       Date:  2008-01-25       Impact factor: 22.384

Review 3.  Self-assembly and transformation of hybrid nano-objects and nanostructures under equilibrium and non-equilibrium conditions.

Authors:  Stephen Mann
Journal:  Nat Mater       Date:  2009-09-06       Impact factor: 43.841

4.  Timing molecular motion and production with a synthetic transcriptional clock.

Authors:  Elisa Franco; Eike Friedrichs; Jongmin Kim; Ralf Jungmann; Richard Murray; Erik Winfree; Friedrich C Simmel
Journal:  Proc Natl Acad Sci U S A       Date:  2011-09-15       Impact factor: 11.205

5.  Rational design of functional and tunable oscillating enzymatic networks.

Authors:  Sergey N Semenov; Albert S Y Wong; R Martijn van der Made; Sjoerd G J Postma; Joost Groen; Hendrik W H van Roekel; Tom F A de Greef; Wilhelm T S Huck
Journal:  Nat Chem       Date:  2015-01-12       Impact factor: 24.427

6.  Temporal Control of Gelation and Polymerization Fronts Driven by an Autocatalytic Enzyme Reaction.

Authors:  Elizabeth Jee; Tamás Bánsági; Annette F Taylor; John A Pojman
Journal:  Angew Chem Weinheim Bergstr Ger       Date:  2016-01-06

7.  Temporal Control of Gelation and Polymerization Fronts Driven by an Autocatalytic Enzyme Reaction.

Authors:  Elizabeth Jee; Tamás Bánsági; Annette F Taylor; John A Pojman
Journal:  Angew Chem Int Ed Engl       Date:  2016-01-06       Impact factor: 15.336

8.  Periodic Nucleation of Calcium Phosphate in a Stirred Biocatalytic Reaction.

Authors:  Bíborka Bohner; Tamás Bánsági; Ágota Tóth; Dezső Horváth; Annette F Taylor
Journal:  Angew Chem Int Ed Engl       Date:  2020-01-09       Impact factor: 15.336

  8 in total

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