Literature DB >> 15647807

Polymorphom of sexually different cucumber (Cucumis sativus L.) NIL lines.

Zbigniew Przybecki1, Magdalena Ewa Kowalczyk, Justyna Witkowicz, Marcin Filipecki, Ewa Siedlecka.   

Abstract

Isolations of polymorphic sequences of two pairs of the NIL lines of cucumber (Cucumis sativus L.), which differ with respect to sex, were carried out using the subtraction hybridization methods of DSC (Differential Subtraction Chain) and GDDSC (Genetically Directed DSC). 266 DSC tags were isolated from the entire genome region, and 38 GDDSC tags were isolated from the region containing the sex genes. Based on the obtained results, the methods used may be considered highly effective. The attained sequences, like 11 AFLP clones obtained earlier [Witkowicz, J. et al. Cell. Mol. Biol. Lett. 8 (2003) 375-381], were characterized by analyzing their hybridization with differential (dhaom) and subtractive cDNA libraries (cDNAsubtractom) from 1- to 2- mm floral buds of the same lines, and by the sequencing of 28 tags. A high average degree of homology was found to exist in the genpolom to dhom and cDNAsubtractom, particularly in the case of "dominant" (when the tester used was a line in which the sex of the plants was dependent upon the dominant allele). This indicates a significant share of coding sequences in the polymorphic genomic tags as well as their share in flower formation. Many of these sequences originate from the sex gene region. Analysis of the sequenced tags showed their interesting composition, including many organelle sequences which transferred into the nucleus, and coding.

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Year:  2004        PMID: 15647807

Source DB:  PubMed          Journal:  Cell Mol Biol Lett        ISSN: 1425-8153            Impact factor:   5.787


  5 in total

1.  The genome sequence of the North-European cucumber (Cucumis sativus L.) unravels evolutionary adaptation mechanisms in plants.

Authors:  Rafał Wóycicki; Justyna Witkowicz; Piotr Gawroński; Joanna Dąbrowska; Alexandre Lomsadze; Magdalena Pawełkowicz; Ewa Siedlecka; Kohei Yagi; Wojciech Pląder; Anna Seroczyńska; Mieczysław Śmiech; Wojciech Gutman; Katarzyna Niemirowicz-Szczytt; Grzegorz Bartoszewski; Norikazu Tagashira; Yoshikazu Hoshi; Mark Borodovsky; Stanisław Karpiński; Stefan Malepszy; Zbigniew Przybecki
Journal:  PLoS One       Date:  2011-07-28       Impact factor: 3.240

2.  Comparative transcriptome analysis reveals new molecular pathways for cucumber genes related to sex determination.

Authors:  Magdalena Pawełkowicz; Leszek Pryszcz; Agnieszka Skarzyńska; Rafał K Wóycicki; Kacper Posyniak; Jacek Rymuszka; Zbigniew Przybecki; Wojciech Pląder
Journal:  Plant Reprod       Date:  2019-02-05       Impact factor: 3.767

3.  Agarose-resolvable InDel markers based on whole genome re-sequencing in cucumber.

Authors:  Yawo Mawunyo Nevame Adedze; Xia Lu; Yingchun Xia; Qiuyue Sun; Chofong G Nchongboh; Md Amirul Alam; Menghua Liu; Xue Yang; Wenting Zhang; Zhijun Deng; Wenhu Li; Longting Si
Journal:  Sci Rep       Date:  2021-02-16       Impact factor: 4.379

Review 4.  The specificity and genetic background of the rye (Secale cereale L.) tissue culture response.

Authors:  Małgorzata Targońska; Aneta Hromada-Judycka; Hanna Bolibok-Brągoszewska; Monika Rakoczy-Trojanowska
Journal:  Plant Cell Rep       Date:  2012-09-25       Impact factor: 4.570

5.  The construction and characteristics of a BAC library for Cucumis sativus L. 'B10'.

Authors:  Wojciech Gutman; Magdalena Pawełkowicz; Rafał Woycicki; Ewa Piszczek; Zbigniew Przybecki
Journal:  Cell Mol Biol Lett       Date:  2007-10-29       Impact factor: 5.787

  5 in total

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