Literature DB >> 15647520

Mobilization of the active MITE transposons mPing and Pong in rice by introgression from wild rice (Zizania latifolia Griseb.).

Xiaohui Shan1, Zhenlan Liu, Zhenying Dong, Yongming Wang, Yu Chen, Xiuyun Lin, Likun Long, Fangpu Han, Yingshan Dong, Bao Liu.   

Abstract

Hybridization between different species plays an important role in plant genome evolution, as well as is a widely used approach for crop improvement. McClintock has predicted that plant wide hybridization constitutes a "genomic shock" whereby cryptic transposable elements may be activated. However, direct experimental evidence showing a causal relationship between plant wide hybridization and transposon mobilization has not yet been reported. The miniature-Ping (mPing) is a recently isolated active miniature inverted-repeat transposable element transposon from rice, which is mobilized by tissue culture and gamma-ray irradiation. We show herein that mPing, together with its putative transposase-encoding partner, Pong, is mobilized in three homologous recombinant inbred lines (RILs), derived from hybridization between rice (cultivar Matsumae) and wild rice (Zizania latifolia Griseb.), harboring introgressed genomic DNA from wild rice. In contrast, both elements remain immobile in two lines sharing the same parentage to the RILs but possessing no introgressed DNA. Thus, we have presented direct evidence that is consistent with McClintock's insight by demonstrating a causal link between wide hybridization and transposon mobilization in rice. In addition, we report an atypical behavior of mPing/Pong mobilization in these lines, i.e., the exclusive absence of footprints after excision.

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Year:  2005        PMID: 15647520     DOI: 10.1093/molbev/msi082

Source DB:  PubMed          Journal:  Mol Biol Evol        ISSN: 0737-4038            Impact factor:   16.240


  61 in total

1.  Analysis of copy-number variation, insertional polymorphism, and methylation status of the tiniest class I (TRIM) and class II (MITE) transposable element families in various rice strains.

Authors:  Omer Baruch; Khalil Kashkush
Journal:  Plant Cell Rep       Date:  2011-12-20       Impact factor: 4.570

2.  Marker utility of miniature inverted-repeat transposable elements for wheat biodiversity and evolution.

Authors:  Beery Yaakov; Elif Ceylan; Katherine Domb; Khalil Kashkush
Journal:  Theor Appl Genet       Date:  2012-05       Impact factor: 5.699

3.  Allele-specific, bidirectional silencing of an alcohol dehydrogenase gene in different organs of interspecific diploid cotton hybrids.

Authors:  Keith L Adams; Jonathan F Wendel
Journal:  Genetics       Date:  2005-09-02       Impact factor: 4.562

4.  Extensive de Novo genomic variation in rice induced by introgression from wild rice (Zizania latifolia Griseb.).

Authors:  Yong-Ming Wang; Zhen-Ying Dong; Zhong-Juan Zhang; Xiu-Yun Lin; Ye Shen; Daowei Zhou; Bao Liu
Journal:  Genetics       Date:  2005-06-03       Impact factor: 4.562

5.  Extent and pattern of DNA methylation alteration in rice lines derived from introgressive hybridization of rice and Zizania latifolia Griseb.

Authors:  Z Y Dong; Y M Wang; Z J Zhang; Y Shen; X Y Lin; X F Ou; F P Han; B Liu
Journal:  Theor Appl Genet       Date:  2006-05-05       Impact factor: 5.699

Review 6.  DNA transposons and the evolution of eukaryotic genomes.

Authors:  Cédric Feschotte; Ellen J Pritham
Journal:  Annu Rev Genet       Date:  2007       Impact factor: 16.830

7.  The AT-hook/PPC domain protein TEK negatively regulates floral repressors including MAF4 and MAF5.

Authors:  Yifeng Xu; Eng-Seng Gan; Toshiro Ito
Journal:  Plant Signal Behav       Date:  2013-05-15

8.  Transposition of a fungal miniature inverted-repeat transposable element through the action of a Tc1-like transposase.

Authors:  Marie Dufresne; Aurélie Hua-Van; Hala Abd El Wahab; Sarrah Ben M'Barek; Christelle Vasnier; Laure Teysset; Gert H J Kema; Marie-Josée Daboussi
Journal:  Genetics       Date:  2006-12-18       Impact factor: 4.562

9.  An interspecific plant hybrid shows novel changes in parental splice forms of genes for splicing factors.

Authors:  Moira Scascitelli; Marie Cognet; Keith L Adams
Journal:  Genetics       Date:  2010-01-25       Impact factor: 4.562

10.  Somaclonal variation at the nucleotide sequence level in rice (Oryza sativa L.) as revealed by RAPD and ISSR markers, and by pairwise sequence analysis.

Authors:  Fredéric Ngezahayo; Yingshan Dong; Bao Liu
Journal:  J Appl Genet       Date:  2007       Impact factor: 3.240

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