Literature DB >> 23733063

The AT-hook/PPC domain protein TEK negatively regulates floral repressors including MAF4 and MAF5.

Yifeng Xu1, Eng-Seng Gan, Toshiro Ito.   

Abstract

Epigenetic regulations of transposable elements (TEs) and TE-like repeat sequences help to protect genomic integrity and control various developmental processes, including flowering time. This complex action of gene silencing requires the coordination of many key players including DNA methylases, histone deacetylases and histone methyltranferases. We have recently reported that an AT-hook DNA binding protein, TRANSPOSABLE ELEMENT SILENCING VIA AT-HOOK (TEK), participates in silencing TEs and TE-like sequence containing genes, such as Ler FLOWERING LOCUS C (FLC) and FWA. TEK knockdown in amiTEK plants causes increased histone acetylation, reduced H3K9me2 and DNA hypomethylation in the target loci, which ultimately leads to the upregulation of FLC and FWA as well as TE reactivation. In this report, we show that, besides FLC, other FLC-like genes MADS AFFECTING FLOWERING 4 (MAF4) and MAF5 are also upregulated in amiTEK. Here we discuss the role of the nuclear matrix protein TEK in the maintenance of genome integrity and in the control of flowering.

Entities:  

Keywords:  AT-hook; Arabidopsis; TEK; flowering time; male sterility; transposable element

Mesh:

Substances:

Year:  2013        PMID: 23733063      PMCID: PMC3999084          DOI: 10.4161/psb.25006

Source DB:  PubMed          Journal:  Plant Signal Behav        ISSN: 1559-2316


  26 in total

1.  AHM1, a novel type of nuclear matrix-localized, MAR binding protein with a single AT hook and a J domain-homologous region.

Authors:  G Morisawa; A Han-Yama; I Moda; A Tamai; M Iwabuchi; T Meshi
Journal:  Plant Cell       Date:  2000-10       Impact factor: 11.277

2.  The A.T-DNA-binding domain of mammalian high mobility group I chromosomal proteins. A novel peptide motif for recognizing DNA structure.

Authors:  R Reeves; M S Nissen
Journal:  J Biol Chem       Date:  1990-05-25       Impact factor: 5.157

3.  SATB1 targets chromatin remodelling to regulate genes over long distances.

Authors:  Dag Yasui; Masaru Miyano; Shutao Cai; Patrick Varga-Weisz; Terumi Kohwi-Shigematsu
Journal:  Nature       Date:  2002-10-10       Impact factor: 49.962

4.  Identification of a MADS-box gene, FLOWERING LOCUS M, that represses flowering.

Authors:  K C Scortecci; S D Michaels; R M Amasino
Journal:  Plant J       Date:  2001-04       Impact factor: 6.417

Review 5.  Molecular biology of HMGA proteins: hubs of nuclear function.

Authors:  R Reeves
Journal:  Gene       Date:  2001-10-17       Impact factor: 3.688

6.  Analysis of the Arabidopsis MADS AFFECTING FLOWERING gene family: MAF2 prevents vernalization by short periods of cold.

Authors:  Oliver J Ratcliffe; Roderick W Kumimoto; Becky J Wong; José Luis Riechmann
Journal:  Plant Cell       Date:  2003-05       Impact factor: 11.277

7.  Tissue-specific nuclear architecture and gene expression regulated by SATB1.

Authors:  Shutao Cai; Hye-Jung Han; Terumi Kohwi-Shigematsu
Journal:  Nat Genet       Date:  2003-05       Impact factor: 38.330

8.  A matrix protein silences transposons and repeats through interaction with retinoblastoma-associated proteins.

Authors:  Yifeng Xu; Yizhong Wang; Hume Stroud; Xiaofeng Gu; Bo Sun; Eng-Seng Gan; Kian-Hong Ng; Steven E Jacobsen; Yuehui He; Toshiro Ito
Journal:  Curr Biol       Date:  2013-02-07       Impact factor: 10.834

9.  Analysis of the molecular basis of flowering time variation in Arabidopsis accessions.

Authors:  Silvia Gazzani; Anthony R Gendall; Clare Lister; Caroline Dean
Journal:  Plant Physiol       Date:  2003-05-22       Impact factor: 8.340

10.  Attenuation of FLOWERING LOCUS C activity as a mechanism for the evolution of summer-annual flowering behavior in Arabidopsis.

Authors:  Scott D Michaels; Yuehui He; Katia C Scortecci; Richard M Amasino
Journal:  Proc Natl Acad Sci U S A       Date:  2003-08-06       Impact factor: 11.205

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  6 in total

1.  Genome-wide identification and expression analysis of the AT-hook Motif Nuclear Localized gene family in soybean.

Authors:  Min Wang; Bowei Chen; Wei Zhou; Linan Xie; Lishan Wang; Yonglan Zhang; Qingzhu Zhang
Journal:  BMC Genomics       Date:  2021-05-18       Impact factor: 3.969

2.  Sugarcane mosaic virus mediated changes in cytosine methylation pattern and differentially transcribed fragments in resistance-contrasting sugarcane genotypes.

Authors:  Marcel Fernando da Silva; Marcos Cesar Gonçalves; Michael Dos Santos Brito; Cibele Nataliane Medeiros; Ricardo Harakava; Marcos Guimarães de Andrade Landell; Luciana Rossini Pinto
Journal:  PLoS One       Date:  2020-11-09       Impact factor: 3.240

3.  Overexpression of AtAHL20 causes delayed flowering in Arabidopsis via repression of FT expression.

Authors:  Reuben Tayengwa; Pushpa Sharma Koirala; Courtney F Pierce; Breanna E Werner; Michael M Neff
Journal:  BMC Plant Biol       Date:  2020-12-11       Impact factor: 4.215

4.  SUPPRESSOR OF PHYTOCHROME B-4 #3 reduces the expression of PIF-activated genes and increases expression of growth repressors to regulate hypocotyl elongation in short days.

Authors:  Caitlin N Jacques; David S Favero; Ayako Kawamura; Takamasa Suzuki; Keiko Sugimoto; Michael M Neff
Journal:  BMC Plant Biol       Date:  2022-08-15       Impact factor: 5.260

5.  Characteristics of the AT-Hook Motif Containing Nuclear Localized (AHL) Genes in Carrot Provides Insight into Their Role in Plant Growth and Storage Root Development.

Authors:  Gabriela Machaj; Dariusz Grzebelus
Journal:  Genes (Basel)       Date:  2021-05-18       Impact factor: 4.096

6.  Comprehensive In Silico Analysis and Transcriptional Profiles Highlight the Importance of Mitochondrial Dicarboxylate Carriers (DICs) on Hypoxia Response in Both Arabidopsis thaliana and Eucalyptus grandis.

Authors:  Pedro Barreto; Mariana L C Arcuri; Rômulo Pedro Macêdo Lima; Celso Luis Marino; Ivan G Maia
Journal:  Plants (Basel)       Date:  2022-01-11
  6 in total

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