Literature DB >> 15647301

Protein refinement: a new challenge for CASP in its 10th anniversary.

Alfonso Valencia.   

Abstract

Entities:  

Mesh：

Substances：

Year:  2005        PMID： 15647301     DOI： 10.1093/bioinformatics/bti249

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


× No keyword cloud information.
  10 in total

Review 1.  The evaluation of protein structure prediction results.

Authors:  Domenico Cozzetto; Alejandro Giorgetti; Domenico Raimondo; Anna Tramontano
Journal:  Mol Biotechnol       Date:  2007-12-11       Impact factor: 2.695

2.  Use of decoys to optimize an all-atom force field including hydration.

Authors:  Yelena A Arnautova; Harold A Scheraga
Journal:  Biophys J       Date:  2008-05-23       Impact factor: 4.033

3.  Folding processes of the B domain of protein A to the native state observed in all-atom ab initio folding simulations.

Authors:  Hongxing Lei; Chun Wu; Zhi-Xiang Wang; Yaoqi Zhou; Yong Duan
Journal:  J Chem Phys       Date:  2008-06-21       Impact factor: 3.488

4.  A novel method for predicting and using distance constraints of high accuracy for refining protein structure prediction.

Authors:  Tianyun Liu; Jeremy A Horst; Ram Samudrala
Journal:  Proteins       Date:  2009-10

5.  Refining homology models by combining replica-exchange molecular dynamics and statistical potentials.

Authors:  Jiang Zhu; Hao Fan; Xavier Periole; Barry Honig; Alan E Mark
Journal:  Proteins       Date:  2008-09

6.  Characterizing the state of the art in the computational assignment of gene function: lessons from the first critical assessment of functional annotation (CAFA).

Authors:  Jesse Gillis; Paul Pavlidis
Journal:  BMC Bioinformatics       Date:  2013       Impact factor: 3.169

7.  Refining near-native protein-protein docking decoys by local resampling and energy minimization.

Authors:  Shide Liang; Guangce Wang; Yaoqi Zhou
Journal:  Proteins       Date:  2009-08-01

8.  A decoy set for the thermostable subdomain from chicken villin headpiece, comparison of different free energy estimators.

Authors:  Federico Fogolari; Silvio C E Tosatto; Giorgio Colombo
Journal:  BMC Bioinformatics       Date:  2005-12-14       Impact factor: 3.169

9.  Improving the accuracy of template-based predictions by mixing and matching between initial models.

Authors:  Tianyun Liu; Michal Guerquin; Ram Samudrala
Journal:  BMC Struct Biol       Date:  2008-05-05

10.  Homology modeling a fast tool for drug discovery: current perspectives.

Authors:  V K Vyas; R D Ukawala; M Ghate; C Chintha
Journal:  Indian J Pharm Sci       Date:  2012-01       Impact factor: 0.975
  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.