Literature DB >> 15643887

Kinetics of acid-induced spectral changes in the GFPmut2 chromophore.

Stefania Abbruzzetti1, Elena Grandi, Cristiano Viappiani, Sara Bologna, Barbara Campanini, Samanta Raboni, Stefano Bettati, Andrea Mozzarelli.   

Abstract

We have used a nanosecond pH-jump technique, coupled with simultaneous transient absorption and fluorescence emission detection, to characterize the dynamics of the acid-induced spectral changes in the GFPmut2 chromophore. Disappearance of the absorbance at 488 nm and the green fluorescence emission occurs with a thermally activated, double exponential relaxation. To understand the source of the two transients we have introduced mutations in amino acid residues that interact with the chromophore (H148G, T203V, and E222Q). Results indicate that the faster transient is associated with proton binding from the solution, while the second process, smaller in amplitude, is attributed to structural rearrangement of the amino acids surrounding the chromophore. The protonation rate shows a 3-fold increase for the H148G mutant, demonstrating that His148 plays a key role in protecting the chromophore from the solvent. The deprotonation rate for T203V is an order of magnitude smaller, showing that the hydrogen bond with the hydroxyl of Thr203 is important in stabilizing the deprotonated form of the chromophore. A kinetic model suggests that, in addition to protecting the chromophore from the solvent, His148 may act as the primary acceptor for the protons on the way to the chromophore.

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Year:  2005        PMID: 15643887     DOI: 10.1021/ja045400r

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  11 in total

1.  Tracking unfolding and refolding of single GFPmut2 molecules.

Authors:  Fabio Cannone; Sara Bologna; Barbara Campanini; Alberto Diaspro; Stefano Bettati; Andrea Mozzarelli; Giuseppe Chirico
Journal:  Biophys J       Date:  2005-07-01       Impact factor: 4.033

2.  Evidence of discrete substates and unfolding pathways in green fluorescent protein.

Authors:  Giancarlo Baldini; Fabio Cannone; Giuseppe Chirico; Maddalena Collini; Barbara Campanini; Stefano Bettati; Andrea Mozzarelli
Journal:  Biophys J       Date:  2006-12-01       Impact factor: 4.033

3.  GFP-mut2 proteins in trehalose-water matrixes: spatially heterogeneous protein-water-sugar structures.

Authors:  Laura D'Alfonso; Maddalena Collini; Fabio Cannone; Giuseppe Chirico; Barbara Campanini; Grazia Cottone; Lorenzo Cordone
Journal:  Biophys J       Date:  2007-04-06       Impact factor: 4.033

4.  Photophysical Behavior of mNeonGreen, an Evolutionarily Distant Green Fluorescent Protein.

Authors:  Frederik Steiert; Eugene P Petrov; Peter Schultz; Petra Schwille; Thomas Weidemann
Journal:  Biophys J       Date:  2018-04-27       Impact factor: 4.033

5.  Proton Transport Mechanism of M2 Proton Channel Studied by Laser-Induced pH Jump.

Authors:  Ban-Seok Jeong; R Brian Dyer
Journal:  J Am Chem Soc       Date:  2017-05-08       Impact factor: 15.419

6.  Spectroscopic and structural study of proton and halide ion cooperative binding to gfp.

Authors:  Daniele Arosio; Gianpiero Garau; Fernanda Ricci; Laura Marchetti; Ranieri Bizzarri; Riccardo Nifosì; Fabio Beltram
Journal:  Biophys J       Date:  2007-04-13       Impact factor: 4.033

7.  Functional characterization and transcriptional repression by Lacticaseibacillus paracasei DinJ-YafQ.

Authors:  Aleksandra Anna Bonini; Stefano Maggi; Giulia Mori; Dario Carnuccio; Danila Delfino; Davide Cavazzini; Alberto Ferrari; Alessia Levante; Yoshihiro Yamaguchi; Claudio Rivetti; Claudia Folli
Journal:  Appl Microbiol Biotechnol       Date:  2022-10-04       Impact factor: 5.560

Review 8.  Fast kinetics of calcium signaling and sensor design.

Authors:  Shen Tang; Florence Reddish; You Zhuo; Jenny J Yang
Journal:  Curr Opin Chem Biol       Date:  2015-07-04       Impact factor: 8.822

9.  Environment effects on the oscillatory unfolding kinetics of GFP.

Authors:  Fabio Cannone; Maddalena Collini; Giuseppe Chirico; Giancarlo Baldini; Stefano Bettati; Barbara Campanini; Andrea Mozzarelli
Journal:  Eur Biophys J       Date:  2007-04-12       Impact factor: 1.733

10.  Ground-state proton transfer kinetics in green fluorescent protein.

Authors:  Luke M Oltrogge; Quan Wang; Steven G Boxer
Journal:  Biochemistry       Date:  2014-09-11       Impact factor: 3.162

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