Literature DB >> 15640810

The ecology of the genome - mobile DNA elements and their hosts.

John F Y Brookfield1.   

Abstract

The genomes of multicellular eukaryotes provide information that determines the phenotype. However, not all sequences in the genome are required for this purpose. Other sequences are often selfish in their actions and interact in complex ways. Here, an analogy is developed between the components of the genome, including mobile DNA elements, and an ecological community. Unlike ecological communities, however, the slow rates at which genomes change allow us to reconstruct patterns of interaction that stretch back tens or hundreds of millions of years.

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Year:  2005        PMID: 15640810     DOI: 10.1038/nrg1524

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  76 in total

1.  In search of lost trajectories: Recovering the diversification of transposable elements.

Authors:  Timothée Flutre; Emmanuelle Permal; Hadi Quesneville
Journal:  Mob Genet Elements       Date:  2011-07-01

2.  Tropical Africa as a cradle for horizontal transfers of transposable elements between species of the genera Drosophila and Zaprionus.

Authors:  Claudia Ma Carareto
Journal:  Mob Genet Elements       Date:  2011-09-01

Review 3.  Male germline control of transposable elements.

Authors:  Jianqiang Bao; Wei Yan
Journal:  Biol Reprod       Date:  2012-05-31       Impact factor: 4.285

4.  A brief history of the status of transposable elements: from junk DNA to major players in evolution.

Authors:  Christian Biémont
Journal:  Genetics       Date:  2010-12       Impact factor: 4.562

5.  Insertional polymorphism and antiquity of PDR1 retrotransposon insertions in pisum species.

Authors:  Runchun Jing; Maggie R Knox; Jennifer M Lee; Alexander V Vershinin; Michael Ambrose; T H Noel Ellis; Andrew J Flavell
Journal:  Genetics       Date:  2005-08-05       Impact factor: 4.562

6.  Population genetics models of competition between transposable element subfamilies.

Authors:  Arnaud Le Rouzic; Pierre Capy
Journal:  Genetics       Date:  2006-08-03       Impact factor: 4.562

7.  Teaching an old dog new tricks: SINEs of canine genomic diversity.

Authors:  Richard Cordaux; Mark A Batzer
Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-23       Impact factor: 11.205

8.  Long-term evolution of transposable elements.

Authors:  Arnaud Le Rouzic; Thibaud S Boutin; Pierre Capy
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-26       Impact factor: 11.205

9.  Microbial variome database: point mutations, adaptive or not, in bacterial core genomes.

Authors:  Sujay Chattopadhyay; Fred Taub; Sandip Paul; Scott J Weissman; Evgeni V Sokurenko
Journal:  Mol Biol Evol       Date:  2013-03-14       Impact factor: 16.240

10.  Exogenous gypsy insulator sequences modulate transgene expression in the malaria vector mosquito, Anopheles stephensi.

Authors:  Rebeca Carballar-Lejarazú; Nijole Jasinskiene; Anthony A James
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-12       Impact factor: 11.205

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