Literature DB >> 15640241

Molecular characterization of resistance-nodulation-division transporters from solvent- and drug-resistant bacteria in petroleum-contaminated soil.

Norika Meguro1, Yumiko Kodama, Maria-Trinidad Gallegos, Kazuya Watanabe.   

Abstract

PCR assays for analyzing resistance-nodulation-division transporters from solvent- and drug-resistant bacteria in soil were developed. Sequence analysis of amplicons showed that the PCR successfully retrieved transporter gene fragments from soil. Most of the genes retrieved from petroleum-contaminated soils formed a cluster (cluster PCS) that was distantly related to known transporter genes. Competitive PCR showed that the abundance of PCS genes is increased in petroleum-contaminated soil.

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Year:  2005        PMID： 15640241      PMCID： PMC544201          DOI： 10.1128/AEM.71.1.580-586.2005

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  40 in total

1.  Design and evaluation of PCR primers to amplify bacterial 16S ribosomal DNA fragments used for community fingerprinting.

Authors:  K Watanabe; Y Kodama; S Harayama
Journal:  J Microbiol Methods       Date:  2001-04       Impact factor: 2.363

Review 2.  Multiple responses of gram-negative bacteria to organic solvents.

Authors:  A Segura; E Duque; G Mosqueda; J L Ramos; F Junker
Journal:  Environ Microbiol       Date:  1999-06       Impact factor: 5.491

3.  Complete genome structure of the nitrogen-fixing symbiotic bacterium Mesorhizobium loti (supplement).

Authors:  T Kaneko; Y Nakamura; S Sato; E Asamizu; T Kato; S Sasamoto; A Watanabe; K Idesawa; A Ishikawa; K Kawashima; T Kimura; Y Kishida; C Kiyokawa; M Kohara; M Matsumoto; A Matsuno; Y Mochizuki; S Nakayama; N Nakazaki; S Shimpo; M Sugimoto; C Takeuchi; M Yamada; S Tabata
Journal:  DNA Res       Date:  2000-12-31       Impact factor: 4.458

4.  Novel toluene elimination system in a toluene-tolerant microorganism.

Authors:  H Kobayashi; K Uematsu; H Hirayama; K Horikoshi
Journal:  J Bacteriol       Date:  2000-11       Impact factor: 3.490

5.  Molecular characterization of bacterial populations in petroleum-contaminated groundwater discharged from underground crude oil storage cavities.

Authors:  K Watanabe; K Watanabe; Y Kodama; K Syutsubo; S Harayama
Journal:  Appl Environ Microbiol       Date:  2000-11       Impact factor: 4.792

Review 6.  Multidrug resistance mechanisms: drug efflux across two membranes.

Authors:  H I Zgurskaya; H Nikaido
Journal:  Mol Microbiol       Date:  2000-07       Impact factor: 3.501

Review 7.  The RND permease superfamily: an ancient, ubiquitous and diverse family that includes human disease and development proteins.

Authors:  T T Tseng; K S Gratwick; J Kollman; D Park; D H Nies; A Goffeau; M H Saier
Journal:  J Mol Microbiol Biotechnol       Date:  1999-08

8.  Three efflux pumps are required to provide efficient tolerance to toluene in Pseudomonas putida DOT-T1E.

Authors:  A Rojas; E Duque; G Mosqueda; G Golden; A Hurtado; J L Ramos; A Segura
Journal:  J Bacteriol       Date:  2001-07       Impact factor: 3.490

9.  Mycobacterium diversity and pyrene mineralization in petroleum-contaminated soils.

Authors:  P Y Cheung; B K Kinkle
Journal:  Appl Environ Microbiol       Date:  2001-05       Impact factor: 4.792

10.  Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1.

Authors:  O White; J A Eisen; J F Heidelberg; E K Hickey; J D Peterson; R J Dodson; D H Haft; M L Gwinn; W C Nelson; D L Richardson; K S Moffat; H Qin; L Jiang; W Pamphile; M Crosby; M Shen; J J Vamathevan; P Lam; L McDonald; T Utterback; C Zalewski; K S Makarova; L Aravind; M J Daly; K W Minton; R D Fleischmann; K A Ketchum; K E Nelson; S Salzberg; H O Smith; J C Venter; C M Fraser
Journal:  Science       Date:  1999-11-19       Impact factor: 47.728
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  7 in total

1.  Detection of viable Cryptosporidium parvum in soil by reverse transcription-real-time PCR targeting hsp70 mRNA.

Authors:  Zhanbei Liang; Ann Keeley
Journal:  Appl Environ Microbiol       Date:  2011-07-29       Impact factor: 4.792

2.  Transcriptome analysis reveals that multidrug efflux genes are upregulated to protect Pseudomonas aeruginosa from pentachlorophenol stress.

Authors:  Jocelyn Fraga Muller; Ann M Stevens; Johanna Craig; Nancy G Love
Journal:  Appl Environ Microbiol       Date:  2007-05-25       Impact factor: 4.792

3.  Restoring biochemical activity and bacterial diversity in a trichloroethylene-contaminated soil: the reclamation effect of vermicomposted olive wastes.

Authors:  Beatriz Moreno; Astrid Vivas; Rogelio Nogales; Cristina Macci; Grazia Masciandaro; Emilio Benitez
Journal:  Environ Sci Pollut Res Int       Date:  2008-08-27       Impact factor: 4.223

Review 4.  Structural and Functional Diversity of Resistance-Nodulation-Cell Division Transporters.

Authors:  Philip A Klenotic; Mitchell A Moseng; Christopher E Morgan; Edward W Yu
Journal:  Chem Rev       Date:  2020-11-19       Impact factor: 60.622

5.  Characterization of the RND family of multidrug efflux pumps: in silico to in vivo confirmation of four functionally distinct subgroups.

Authors:  Patricia Godoy; Antonio J Molina-Henares; Jesús de la Torre; Estrella Duque; Juan L Ramos
Journal:  Microb Biotechnol       Date:  2010-11       Impact factor: 5.813

6.  Draft genome sequence of Rhodomicrobium udaipurense JA643T with special reference to hopanoid biosynthesis.

Authors:  L Tushar; Ch Sasikala; Ch V Ramana
Journal:  DNA Res       Date:  2014-08-12       Impact factor: 4.458

7.  Multiple responses of gram-positive and gram-negative bacteria to mixture of hydrocarbons.

Authors:  Mihaela Marilena Lăzăroaie
Journal:  Braz J Microbiol       Date:  2010-09-01       Impact factor: 2.476
  7 in total

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