Literature DB >> 15640230

Intracellular butyryl phosphate and acetyl phosphate concentrations in Clostridium acetobutylicum and their implications for solvent formation.

Yinsuo Zhao1, Christopher A Tomas, Fredrick B Rudolph, Eleftherios T Papoutsakis, George N Bennett.   

Abstract

It has been suggested (L. H. Harris, R. P. Desai, N. E. Welker, and E. T. Papoutsakis, Biotechnol. Bioeng. 67:1-11, 2000) that butyryl phosphate (BuP) is a regulator of solventogenesis in Clostridium acetobutylicum. Here, we determined BuP and acetyl phosphate (AcP) levels in fermentations of C. acetobutylicum wild type (WT), degenerate strain M5, a butyrate kinase (buk) mutant, and a phosphotransacetylase (pta) mutant. A sensitive method was developed to measure BuP and AcP in the same sample. Compared to the WT, the buk mutant had higher levels of BuP and AcP; the BuP levels were high during the early exponential phase, and there was a peak corresponding to solvent production. Consistent with this, solvent formation was initiated significantly earlier and was much stronger in the buk mutant than in all other strains. For all strains, initiation of butanol formation corresponded to a BuP peak concentration that was more than 60 to 70 pmol/g (dry weight), and higher and sustained levels corresponded to higher butanol formation fluxes. The BuP levels never exceeded 40 to 50 pmol/g (dry weight) in strain M5, which produces no solvents. The BuP profiles were bimodal, and there was a second peak midway through solventogenesis that corresponded to carboxylic acid reutilization. AcP showed a delayed single peak during late solventogenesis corresponding to acetate reutilization. As expected, in the pta mutant the AcP levels were very low, yet this strain exhibited strong butanol production. These data suggest that BuP is a regulatory molecule that may act as a phosphodonor of transcriptional factors. DNA array-based transcriptional analysis of the buk and M5 mutants demonstrated that high BuP levels corresponded to downregulation of flagellar genes and upregulation of solvent formation and stress genes.

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Year:  2005        PMID: 15640230      PMCID: PMC544202          DOI: 10.1128/AEM.71.1.530-537.2005

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  37 in total

1.  Northern, morphological, and fermentation analysis of spo0A inactivation and overexpression in Clostridium acetobutylicum ATCC 824.

Authors:  Latonia M Harris; Neil E Welker; Eleftherios T Papoutsakis
Journal:  J Bacteriol       Date:  2002-07       Impact factor: 3.490

2.  Transcriptional analysis of butanol stress and tolerance in Clostridium acetobutylicum.

Authors:  Christopher A Tomas; Jeffrey Beamish; Eleftherios T Papoutsakis
Journal:  J Bacteriol       Date:  2004-04       Impact factor: 3.490

3.  Effects of propionate and acetate additions on solvent production in batch cultures of Clostridium acetobutylicum.

Authors:  M H Hüsemann; E T Papoutsakis
Journal:  Appl Environ Microbiol       Date:  1990-05       Impact factor: 4.792

4.  Micromethod for the measurement of acetyl phosphate and acetyl coenzyme A.

Authors:  A G Hunt
Journal:  Methods Enzymol       Date:  1986       Impact factor: 1.600

5.  Genetic manipulation of acid and solvent formation in clostridium acetobutylicum ATCC 824

Authors: 
Journal:  Biotechnol Bioeng       Date:  1998-04-05       Impact factor: 4.530

6.  The genes for butanol and acetone formation in Clostridium acetobutylicum ATCC 824 reside on a large plasmid whose loss leads to degeneration of the strain.

Authors:  E Cornillot; R V Nair; E T Papoutsakis; P Soucaille
Journal:  J Bacteriol       Date:  1997-09       Impact factor: 3.490

7.  Cloning and expression of Clostridium acetobutylicum phosphotransbutyrylase and butyrate kinase genes in Escherichia coli.

Authors:  J W Cary; D J Petersen; E T Papoutsakis; G N Bennett
Journal:  J Bacteriol       Date:  1988-10       Impact factor: 3.490

8.  DNA array-based transcriptional analysis of asporogenous, nonsolventogenic Clostridium acetobutylicum strains SKO1 and M5.

Authors:  Christopher A Tomas; Keith V Alsaker; Hendrik P J Bonarius; Wouter T Hendriksen; He Yang; Jeffrey A Beamish; Carlos J Paredes; Eleftherios T Papoutsakis
Journal:  J Bacteriol       Date:  2003-08       Impact factor: 3.490

9.  Cluster analysis and display of genome-wide expression patterns.

Authors:  M B Eisen; P T Spellman; P O Brown; D Botstein
Journal:  Proc Natl Acad Sci U S A       Date:  1998-12-08       Impact factor: 11.205

10.  A segmental nearest neighbor normalization and gene identification method gives superior results for DNA-array analysis.

Authors:  He Yang; Hadar Haddad; Christopher Tomas; Keith Alsaker; E Terry Papoutsakis
Journal:  Proc Natl Acad Sci U S A       Date:  2003-01-15       Impact factor: 11.205

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  28 in total

1.  Dynamics of genomic-library enrichment and identification of solvent tolerance genes for Clostridium acetobutylicum.

Authors:  Jacob R Borden; Eleftherios Terry Papoutsakis
Journal:  Appl Environ Microbiol       Date:  2007-03-02       Impact factor: 4.792

2.  Genetics and Physiology of Acetate Metabolism by the Pta-Ack Pathway of Streptococcus mutans.

Authors:  Jeong Nam Kim; Sang-Joon Ahn; Robert A Burne
Journal:  Appl Environ Microbiol       Date:  2015-05-15       Impact factor: 4.792

3.  Metabolome remodeling during the acidogenic-solventogenic transition in Clostridium acetobutylicum.

Authors:  Daniel Amador-Noguez; Ian A Brasg; Xiao-Jiang Feng; Nathaniel Roquet; Joshua D Rabinowitz
Journal:  Appl Environ Microbiol       Date:  2011-09-23       Impact factor: 4.792

4.  Metabolic engineering of Clostridium acetobutylicum ATCC 824 for isopropanol-butanol-ethanol fermentation.

Authors:  Joungmin Lee; Yu-Sin Jang; Sung Jun Choi; Jung Ae Im; Hyohak Song; Jung Hee Cho; Do Young Seung; E Terry Papoutsakis; George N Bennett; Sang Yup Lee
Journal:  Appl Environ Microbiol       Date:  2011-12-30       Impact factor: 4.792

5.  Butanol production from crystalline cellulose by cocultured Clostridium thermocellum and Clostridium saccharoperbutylacetonicum N1-4.

Authors:  Shunichi Nakayama; Keiji Kiyoshi; Toshimori Kadokura; Atsumi Nakazato
Journal:  Appl Environ Microbiol       Date:  2011-07-15       Impact factor: 4.792

6.  Effects of nutritional enrichment on the production of acetone-butanol-ethanol (ABE) by Clostridium acetobutylicum.

Authors:  Sung Jun Choi; Joungmin Lee; Yu-Sin Jang; Jin Hwan Park; Sang Yup Lee; In Ho Kim
Journal:  J Microbiol       Date:  2012-12-30       Impact factor: 3.422

7.  Protein Acetylation and Butyrylation Regulate the Phenotype and Metabolic Shifts of the Endospore-forming Clostridium acetobutylicum.

Authors:  Jun-Yu Xu; Zhen Xu; XinXin Liu; Minjia Tan; Bang-Ce Ye
Journal:  Mol Cell Proteomics       Date:  2018-03-09       Impact factor: 5.911

8.  Transcriptional Profile during Deoxycholate-Induced Sporulation in a Clostridium perfringens Isolate Causing Foodborne Illness.

Authors:  Mayo Yasugi; Daisuke Okuzaki; Ritsuko Kuwana; Hiromu Takamatsu; Masaya Fujita; Mahfuzur R Sarker; Masami Miyake
Journal:  Appl Environ Microbiol       Date:  2016-05-02       Impact factor: 4.792

9.  Genome-scale model for Clostridium acetobutylicum: Part I. Metabolic network resolution and analysis.

Authors:  Ryan S Senger; Eleftherios T Papoutsakis
Journal:  Biotechnol Bioeng       Date:  2008-12-01       Impact factor: 4.530

10.  Development of a gene knockout system using mobile group II introns (Targetron) and genetic disruption of acid production pathways in Clostridium beijerinckii.

Authors:  Yi Wang; Xiangzhen Li; Caroline B Milne; Holger Janssen; Weiyin Lin; Gloria Phan; Huiying Hu; Yong-Su Jin; Nathan D Price; Hans P Blaschek
Journal:  Appl Environ Microbiol       Date:  2013-07-19       Impact factor: 4.792

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