Literature DB >> 15631455

An extremely stable and orthogonal DNA base pair with a simplified three-carbon backbone.

Lilu Zhang1, Eric Meggers.   

Abstract

A nucleotide C3HQ with a minimal three-carbon backbone displays unprecedented pairing strength and orthogonality in a homopair C3HQ:C3HQ in the presence of one equivalent of Cu2+. The pairing stability in DNA even exceeds the related base pair having the regular 2'-deoxyribose backbone. This discovery of a synergy between an artificial backbone and base-pairing scheme opens new avenues for the economical design of modified oligonucleotides with tailored properties.

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Year:  2005        PMID: 15631455     DOI: 10.1021/ja043904j

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  12 in total

1.  Toward a designed, functioning genetic system with expanded-size base pairs: solution structure of the eight-base xDNA double helix.

Authors:  Stephen R Lynch; Haibo Liu; Jianmin Gao; Eric T Kool
Journal:  J Am Chem Soc       Date:  2006-11-15       Impact factor: 15.419

2.  Metal-bipyridine complexes in DNA backbones and effects on thermal stability.

Authors:  Mildred M Rodriguez-Ramos; Jonathan J Wilker
Journal:  J Biol Inorg Chem       Date:  2010-02-26       Impact factor: 3.358

3.  Evolution of functional nucleic acids in the presence of nonheritable backbone heterogeneity.

Authors:  Simon G Trevino; Na Zhang; Mark P Elenko; Andrej Lupták; Jack W Szostak
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-08       Impact factor: 11.205

4.  Sensing metal ions with DNA building blocks: fluorescent pyridobenzimidazole nucleosides.

Authors:  Su Jeong Kim; Eric T Kool
Journal:  J Am Chem Soc       Date:  2006-05-10       Impact factor: 15.419

Review 5.  Primitive genetic polymers.

Authors:  Aaron E Engelhart; Nicholas V Hud
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-05-12       Impact factor: 10.005

6.  Reversible metal-dependent destabilization and stabilization of a stem-chelate-loop probe binding to an unmodified DNA target.

Authors:  Joel R Morgan; David V X Nguyen; Angela R Frohman; Sara R Rybka; John A Zebala
Journal:  Bioconjug Chem       Date:  2012-09-20       Impact factor: 4.774

7.  Enzymatic synthesis of DNA on glycerol nucleic acid templates without stable duplex formation between product and template.

Authors:  Ching-Hsuan Tsai; Jingyang Chen; Jack W Szostak
Journal:  Proc Natl Acad Sci U S A       Date:  2007-09-04       Impact factor: 11.205

8.  Controllable DNA strand displacement by independent metal-ligand complexation.

Authors:  Liang-Liang Wang; Qiu-Long Zhang; Yang Wang; Yan Liu; Jiao Lin; Fan Xie; Liang Xu
Journal:  Chem Sci       Date:  2021-05-18       Impact factor: 9.825

9.  Enzymatic primer-extension with glycerol-nucleoside triphosphates on DNA templates.

Authors:  Jesse J Chen; Ching-Hsuan Tsai; Xin Cai; Allen T Horhota; Larry W McLaughlin; Jack W Szostak
Journal:  PLoS One       Date:  2009-03-23       Impact factor: 3.240

10.  Second generation silver(I)-mediated imidazole base pairs.

Authors:  Susanne Hensel; Nicole Megger; Kristina Schweizer; Jens Müller
Journal:  Beilstein J Org Chem       Date:  2014-09-09       Impact factor: 2.883

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