Literature DB >> 15620350

A ribonucleolytic rat torpedoes RNA polymerase II.

Weifei Luo1, David Bentley.   

Abstract

Three recent papers reveal a fascinating link between pol II termination and ribonucleolytic decay of the nascent transcript by a 5'-3' exonuclease (yeast Rat1 and human Xrn2). The exonuclease travels with pol II and gains access to the nascent RNA after endonucleolytic cleavage at the poly(A) site or at a second cotranscriptional cleavage site (CoTC). It is then thought to track in a 5'-3' direction like a guided torpedo that ultimately helps dissociate the RNA polymerase elongation complex.

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 15620350     DOI: 10.1016/j.cell.2004.11.041

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  14 in total

1.  CTD-dependent dismantling of the RNA polymerase II elongation complex by the pre-mRNA 3'-end processing factor, Pcf11.

Authors:  Zhiqiang Zhang; Jianhua Fu; David S Gilmour
Journal:  Genes Dev       Date:  2005-07-01       Impact factor: 11.361

2.  The role of Rat1 in coupling mRNA 3'-end processing to transcription termination: implications for a unified allosteric-torpedo model.

Authors:  Weifei Luo; Arlen W Johnson; David L Bentley
Journal:  Genes Dev       Date:  2006-04-05       Impact factor: 11.361

3.  In vivo dynamics of RNA polymerase II transcription.

Authors:  Xavier Darzacq; Yaron Shav-Tal; Valeria de Turris; Yehuda Brody; Shailesh M Shenoy; Robert D Phair; Robert H Singer
Journal:  Nat Struct Mol Biol       Date:  2007-08-05       Impact factor: 15.369

4.  The torpedo effect in Bacillus subtilis: RNase J1 resolves stalled transcription complexes.

Authors:  Michaela Šiková; Jana Wiedermannová; Martin Převorovský; Ivan Barvík; Petra Sudzinová; Olga Kofroňová; Oldřich Benada; Hana Šanderová; Ciarán Condon; Libor Krásný
Journal:  EMBO J       Date:  2019-12-16       Impact factor: 11.598

5.  Studies of the 5' exonuclease and endonuclease activities of CPSF-73 in histone pre-mRNA processing.

Authors:  Xiao-cui Yang; Kelly D Sullivan; William F Marzluff; Zbigniew Dominski
Journal:  Mol Cell Biol       Date:  2008-10-27       Impact factor: 4.272

6.  Biochemical and biophysical properties of a putative hub protein expressed by vaccinia virus.

Authors:  Nicole E Kay; Travis W Bainbridge; Richard C Condit; Michael R Bubb; Reuben E Judd; Balasubramanian Venkatakrishnan; Robert McKenna; Susan M D'Costa
Journal:  J Biol Chem       Date:  2013-03-08       Impact factor: 5.157

7.  The role of the putative 3' end processing endonuclease Ysh1p in mRNA and snoRNA synthesis.

Authors:  Monika Garas; Bernhard Dichtl; Walter Keller
Journal:  RNA       Date:  2008-10-29       Impact factor: 4.942

8.  The multifunctional protein p54nrb/PSF recruits the exonuclease XRN2 to facilitate pre-mRNA 3' processing and transcription termination.

Authors:  Syuzo Kaneko; Orit Rozenblatt-Rosen; Matthew Meyerson; James L Manley
Journal:  Genes Dev       Date:  2007-07-15       Impact factor: 11.361

9.  RNA Polymerase II Read-Through Promotes Expression of Neighboring Genes in SAL1-PAP-XRN Retrograde Signaling.

Authors:  Peter A Crisp; Aaron B Smith; Diep R Ganguly; Kevin D Murray; Steven R Eichten; Anthony A Millar; Barry J Pogson
Journal:  Plant Physiol       Date:  2018-10-09       Impact factor: 8.340

10.  Structure and function of the 5'-->3' exoribonuclease Rat1 and its activating partner Rai1.

Authors:  Song Xiang; Amalene Cooper-Morgan; Xinfu Jiao; Megerditch Kiledjian; James L Manley; Liang Tong
Journal:  Nature       Date:  2009-02-04       Impact factor: 49.962

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.