Literature DB >> 15604403

Translation of DNA signals into polymer assembly instructions.

Shiping Liao1, Nadrian C Seeman.   

Abstract

We developed a DNA nanomechanical device that enables the positional synthesis of products whose sequences are determined by the state of the device. This machine emulates the translational capabilities of the ribosome. The device has been prototyped to make specific DNA sequences. The state of the device is established by the addition of DNA set strands. There is no transcriptional relationship between the set strands and the product strands. The device has potential applications that include designer polymer synthesis, encryption of information, and use as a variable-input device for DNA-based computation.

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Year:  2004        PMID: 15604403      PMCID: PMC3470904          DOI: 10.1126/science.1104299

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  8 in total

1.  Using DNA to construct and power a nanoactuator.

Authors:  F C Simmel; B Yurke
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2001-03-29

2.  A DNA-fuelled molecular machine made of DNA.

Authors:  B Yurke; A J Turberfield; A P Mills; F C Simmel; J L Neumann
Journal:  Nature       Date:  2000-08-10       Impact factor: 49.962

3.  A robust DNA mechanical device controlled by hybridization topology.

Authors:  Hao Yan; Xiaoping Zhang; Zhiyong Shen; Nadrian C Seeman
Journal:  Nature       Date:  2002-01-03       Impact factor: 49.962

4.  Nylon/DNA: Single-stranded DNA with a covalently stitched nylon lining.

Authors:  Lei Zhu; Philip S Lukeman; James W Canary; Nadrian C Seeman
Journal:  J Am Chem Soc       Date:  2003-08-27       Impact factor: 15.419

5.  A two-state DNA lattice switched by DNA nanoactuator.

Authors:  Liping Feng; Sung Ha Park; John H Reif; Hao Yan
Journal:  Angew Chem Int Ed Engl       Date:  2003-09-22       Impact factor: 15.336

6.  Paranemic crossover DNA: a generalized Holliday structure with applications in nanotechnology.

Authors:  Zhiyong Shen; Hao Yan; Tong Wang; Nadrian C Seeman
Journal:  J Am Chem Soc       Date:  2004-02-18       Impact factor: 15.419

7.  A nanomechanical device based on the B-Z transition of DNA.

Authors:  C Mao; W Sun; Z Shen; N C Seeman
Journal:  Nature       Date:  1999-01-14       Impact factor: 49.962

8.  DNA double-crossover molecules.

Authors:  T J Fu; N C Seeman
Journal:  Biochemistry       Date:  1993-04-06       Impact factor: 3.162

  8 in total
  38 in total

Review 1.  Predicting and modeling RNA architecture.

Authors:  Eric Westhof; Benoît Masquida; Fabrice Jossinet
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-02-01       Impact factor: 10.005

2.  Double-stranded DNA homology produces a physical signature.

Authors:  Xing Wang; Xiaoping Zhang; Chengde Mao; Nadrian C Seeman
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-28       Impact factor: 11.205

Review 3.  From genes to machines: DNA nanomechanical devices.

Authors:  Nadrian C Seeman
Journal:  Trends Biochem Sci       Date:  2005-03       Impact factor: 13.807

4.  Six-helix bundles designed from DNA.

Authors:  Frederick Mathieu; Shiping Liao; Jens Kopatsch; Tong Wang; Chengde Mao; Nadrian C Seeman
Journal:  Nano Lett       Date:  2005-04       Impact factor: 11.189

5.  Architecture with GIDEON, a program for design in structural DNA nanotechnology.

Authors:  Jeffrey J Birac; William B Sherman; Jens Kopatsch; Pamela E Constantinou; Nadrian C Seeman
Journal:  J Mol Graph Model       Date:  2006-04-19       Impact factor: 2.518

6.  RNA used to control a DNA rotary nanomachine.

Authors:  Hong Zhong; Nadrian C Seeman
Journal:  Nano Lett       Date:  2006-12       Impact factor: 11.189

7.  Operation of a DNA robot arm inserted into a 2D DNA crystalline substrate.

Authors:  Baoquan Ding; Nadrian C Seeman
Journal:  Science       Date:  2006-12-08       Impact factor: 47.728

8.  A simple DNA-based translation system.

Authors:  Alejandra V Garibotti; Shiping Liao; Nadrian C Seeman
Journal:  Nano Lett       Date:  2007-01-23       Impact factor: 11.189

9.  Self-assembled combinatorial encoding nanoarrays for multiplexed biosensing.

Authors:  Chenxiang Lin; Yan Liu; Hao Yan
Journal:  Nano Lett       Date:  2007-02       Impact factor: 11.189

10.  Noncovalent immobilization of streptavidin on in vitro- and in vivo-biotinylated bacterial magnetic particles.

Authors:  Yoshiaki Maeda; Tomoko Yoshino; Masaaki Takahashi; Harumi Ginya; Junko Asahina; Hideji Tajima; Tadashi Matsunaga
Journal:  Appl Environ Microbiol       Date:  2008-06-20       Impact factor: 4.792

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