Literature DB >> 15595849

Mechanism of frameshift (deletion) generated by acetylaminofluorene-derived DNA adducts in vitro.

Shinya Shibutani1, Naomi Suzuki, Arthur P Grollman.   

Abstract

We have investigated the mechanism of frameshift (deletion) mutagenesis induced by acetylaminofluorene- (AAF-) derived DNA adducts. dG-AAF-modified oligodeoxynucleotides, with different bases positioned 5' to the lesion, were annealed to (32)P-labeled 13-mer primers and then used in primer extension reactions catalyzed by the 3'-->5' exonuclease-free Klenow fragment of Escherichia coli DNA polymerase I. When the dNMP positioned opposite dG-AAF could pair with its complementary base at the 5' flanking position, single-base deletions were produced at high frequency. Similarly, when the complementary base was two positions 5' to the dG-AAF, two-base deletions occurred. The relative frequency of base insertions opposite dG-AAF followed the order dCMP > dAMP > dGMP > dTMP; the frequency of dNTP insertion opposite the lesion paralleled the formation of frameshift deletions. When a template designed to induce three-base deletions was used for translesion synthesis catalyzed by the exo(-) Klenow fragment, the expected three-base deletion was formed. When dG-AAF-modified templates containing iterated bases 5' to the lesion were annealed to primers with the complementary dNMP positioned opposite the lesion, the dNMP inserted opposite the dG-AAF tended to pair with the complementary base 5' to the lesion, thereby forming shorter deletions. Taken together, these results support the molecular mechanism for frameshift deletion proposed earlier by Shibutani and Grollman in which direct base insertion precedes misalignment [(1993) J. Biol. Chem. 268, 11703].

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 15595849     DOI: 10.1021/bi048087e

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  11 in total

1.  Mechanism of replication blocking and bypass of Y-family polymerase {eta} by bulky acetylaminofluorene DNA adducts.

Authors:  Stephanie Schorr; Sabine Schneider; Katja Lammens; Karl-Peter Hopfner; Thomas Carell
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-12       Impact factor: 11.205

2.  Translesion synthesis past the C8- and N2-deoxyguanosine adducts of the dietary mutagen 2-Amino-3-methylimidazo[4,5-f]quinoline in the NarI recognition sequence by prokaryotic DNA polymerases.

Authors:  James S Stover; Goutam Chowdhury; Hong Zang; F Peter Guengerich; Carmelo J Rizzo
Journal:  Chem Res Toxicol       Date:  2006-11       Impact factor: 3.739

Review 3.  Biological properties of single chemical-DNA adducts: a twenty year perspective.

Authors:  James C Delaney; John M Essigmann
Journal:  Chem Res Toxicol       Date:  2007-12-12       Impact factor: 3.739

4.  Examination of the long-range effects of aminofluorene-induced conformational heterogeneity and its relevance to the mechanism of translesional DNA synthesis.

Authors:  Srinivasarao Meneni; Fengting Liang; Bongsup P Cho
Journal:  J Mol Biol       Date:  2006-12-15       Impact factor: 5.469

5.  Conformational differences of the C8-deoxyguanosine adduct of 2-amino-3-methylimidazo[4,5-f]quinoline (IQ) within the NarI recognition sequence.

Authors:  C Eric Elmquist; Feng Wang; James S Stover; Michael P Stone; Carmelo J Rizzo
Journal:  Chem Res Toxicol       Date:  2007-02-21       Impact factor: 3.739

6.  Probing the sequence effects on NarI-induced -2 frameshift mutagenesis by dynamic 19F NMR, UV, and CD spectroscopy.

Authors:  Nidhi Jain; Yuyuan Li; Li Zhang; Srinivasa R Meneni; Bongsup P Cho
Journal:  Biochemistry       Date:  2007-10-26       Impact factor: 3.162

7.  Mechanism of translesion synthesis past an equine estrogen-DNA adduct by Y-family DNA polymerases.

Authors:  Manabu Yasui; Naomi Suzuki; Xiaoping Liu; Yoshinori Okamoto; Sung Yeon Kim; Y R Santosh Laxmi; Shinya Shibutani
Journal:  J Mol Biol       Date:  2007-06-09       Impact factor: 5.469

8.  A new anti conformation for N-(deoxyguanosin-8-yl)-2-acetylaminofluorene (AAF-dG) allows Watson-Crick pairing in the Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4).

Authors:  Lihua Wang; Suse Broyde
Journal:  Nucleic Acids Res       Date:  2006-02-01       Impact factor: 16.971

9.  Mechanism of error-free and semitargeted mutagenic bypass of an aromatic amine lesion by Y-family polymerase Dpo4.

Authors:  Olga Rechkoblit; Alexander Kolbanovskiy; Lucy Malinina; Nicholas E Geacintov; Suse Broyde; Dinshaw J Patel
Journal:  Nat Struct Mol Biol       Date:  2010-02-14       Impact factor: 15.369

Review 10.  Error-Prone and Error-Free Translesion DNA Synthesis over Site-Specifically Created DNA Adducts of Aryl Hydrocarbons (3-Nitrobenzanthrone and 4-Aminobiphenyl).

Authors:  Takashi Yagi; Yoshihiro Fujikawa; Tomoko Sawai; Takeji Takamura-Enya; Sayoko Ito-Harashima; Masanobu Kawanishi
Journal:  Toxicol Res       Date:  2015-10-15
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.